Gene Shewana3_4379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4379 
Symbol 
ID4476007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp266060 
End bp266965 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content46% 
IMG OID639720734 
Producthypothetical protein 
Protein accessionYP_863892 
Protein GI117676316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.242099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTAA TCCCCTTCGG CCTTCGTAGT GATGGCTTGT ATATAGATGC AGAGGACGCA 
ACGCGGGGTA AGTCCTGTGA TTGTACTTGC CCATCATGCG GTATTGCCTT AATCGCACGG
CAGGGTGACG TTAATGCGTT CCACTTTGCC CATGACTCCA AAGGTGCGAG TAAGGAAGAG
ATTGAGGCCT GCAAATACTC GTTTTATGTC TCAGTTCGCT ACATGCTGAA GCAGCTTCTA
CAGGGGACAG GCTTGTTATT GTTGCCACCT CTCGAGATTG ACCATCACGG CCAAACGCAC
GTCATTACCA AAAGTTTGCC AATCACGGTG GAGCCCAAGG ACATAACGCC TGATAGTTAT
GAGCAGGATA TTATGTTTGA CTTAATCTTT ACGGTCTCAG GCCGCAAGCT ATGCCTATAC
ATTAGCCATC CTGGTCGCCC CGCGCCGATA TATAACAATC TATCAAGAGA TCAGCACACG
GCGGTACTAG GGCTTGATTT AATTCCTTTC TCAAAGATAT TTAATGAGTT TTACAAACTA
AAATCAGCTC AAACACTACT GCGCGAATGG CTTGAAACGT CCATTAAGGG CAAGCATTGG
ATTTACAATC CAAGGCGCAA TGCGTGGTTT GAGCATCAAC AGGCTAAGGC TCCAGCTGTT
CAGGAGCAGC AACAGCAACA AGTTCTGGTA CAAACCAAGA CTACCCGTGA TCGGATTAAA
GAGCAGATTG CCAAAATGGA CAGGTTGAAC GTAGTCGCTA TATATCGCTG CGTTTTTTGT
CAGTTGGACT TTGAAGGCAG TGCGTTACTC AACTACTGCC CCAAGTGTAA TGACCATCTA
AGTGTGAAAA GAAAATCGGA GATTGCGGCT CAAACTCCAC CTAAAGGCAA GTATCGGTAT
CGATGA
 
Protein sequence
MNLIPFGLRS DGLYIDAEDA TRGKSCDCTC PSCGIALIAR QGDVNAFHFA HDSKGASKEE 
IEACKYSFYV SVRYMLKQLL QGTGLLLLPP LEIDHHGQTH VITKSLPITV EPKDITPDSY
EQDIMFDLIF TVSGRKLCLY ISHPGRPAPI YNNLSRDQHT AVLGLDLIPF SKIFNEFYKL
KSAQTLLREW LETSIKGKHW IYNPRRNAWF EHQQAKAPAV QEQQQQQVLV QTKTTRDRIK
EQIAKMDRLN VVAIYRCVFC QLDFEGSALL NYCPKCNDHL SVKRKSEIAA QTPPKGKYRY
R