Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4379 |
Symbol | |
ID | 4476007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | + |
Start bp | 266060 |
End bp | 266965 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639720734 |
Product | hypothetical protein |
Protein accession | YP_863892 |
Protein GI | 117676316 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.242099 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCTAA TCCCCTTCGG CCTTCGTAGT GATGGCTTGT ATATAGATGC AGAGGACGCA ACGCGGGGTA AGTCCTGTGA TTGTACTTGC CCATCATGCG GTATTGCCTT AATCGCACGG CAGGGTGACG TTAATGCGTT CCACTTTGCC CATGACTCCA AAGGTGCGAG TAAGGAAGAG ATTGAGGCCT GCAAATACTC GTTTTATGTC TCAGTTCGCT ACATGCTGAA GCAGCTTCTA CAGGGGACAG GCTTGTTATT GTTGCCACCT CTCGAGATTG ACCATCACGG CCAAACGCAC GTCATTACCA AAAGTTTGCC AATCACGGTG GAGCCCAAGG ACATAACGCC TGATAGTTAT GAGCAGGATA TTATGTTTGA CTTAATCTTT ACGGTCTCAG GCCGCAAGCT ATGCCTATAC ATTAGCCATC CTGGTCGCCC CGCGCCGATA TATAACAATC TATCAAGAGA TCAGCACACG GCGGTACTAG GGCTTGATTT AATTCCTTTC TCAAAGATAT TTAATGAGTT TTACAAACTA AAATCAGCTC AAACACTACT GCGCGAATGG CTTGAAACGT CCATTAAGGG CAAGCATTGG ATTTACAATC CAAGGCGCAA TGCGTGGTTT GAGCATCAAC AGGCTAAGGC TCCAGCTGTT CAGGAGCAGC AACAGCAACA AGTTCTGGTA CAAACCAAGA CTACCCGTGA TCGGATTAAA GAGCAGATTG CCAAAATGGA CAGGTTGAAC GTAGTCGCTA TATATCGCTG CGTTTTTTGT CAGTTGGACT TTGAAGGCAG TGCGTTACTC AACTACTGCC CCAAGTGTAA TGACCATCTA AGTGTGAAAA GAAAATCGGA GATTGCGGCT CAAACTCCAC CTAAAGGCAA GTATCGGTAT CGATGA
|
Protein sequence | MNLIPFGLRS DGLYIDAEDA TRGKSCDCTC PSCGIALIAR QGDVNAFHFA HDSKGASKEE IEACKYSFYV SVRYMLKQLL QGTGLLLLPP LEIDHHGQTH VITKSLPITV EPKDITPDSY EQDIMFDLIF TVSGRKLCLY ISHPGRPAPI YNNLSRDQHT AVLGLDLIPF SKIFNEFYKL KSAQTLLREW LETSIKGKHW IYNPRRNAWF EHQQAKAPAV QEQQQQQVLV QTKTTRDRIK EQIAKMDRLN VVAIYRCVFC QLDFEGSALL NYCPKCNDHL SVKRKSEIAA QTPPKGKYRY R
|
| |