Gene Shewana3_4300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4300 
Symbol 
ID4476074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp183606 
End bp186752 
Gene Length3147 bp 
Protein Length1048 aa 
Translation table11 
GC content52% 
IMG OID639720657 
ProductCzcA family heavy metal efflux protein 
Protein accessionYP_863815 
Protein GI117676239 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3696] Putative silver efflux pump 
TIGRFAM ID[TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAT GGATTATCCG GCGCTCTGTC GCCAACCGTT TCCTGGTCAT GATGGGGGCC 
CTGTTTCTCA GCATCTGGGG TACATGGACG ATTATTAACA CGCCGGTCGA TGCCTTGCCT
GACCTGTCAG ATGTGCAGGT CATTATTAAA ACCAGCTATC CCGGCCAGGC CCCGCAGATT
GTAGAAAACC AGGTCACCTA TCCACTTACC ACCACCATGC TCTCCGTACC TGGCGCAAAA
ACTGTGCGTG GTTTTTCACA GTTCGGTGAT TCGTATGTAT ATGTCATTTT TGAAGACGGC
ACCGATCTGT ACTGGGCCCG TTCCCGCGTG CTGGAATATC TGAATCAGGT TCAGGGAAAA
CTGCCCGCCG GGGTGAGTTC TGAAATCGGT CCGGATGCCA CGGGTGTGGG CTGGATTTTT
GAATATGCCC TTGTCGATCG CAGCGGAAAA CACGACCTTT CAGAACTGCG TTCTCTGCAG
GACTGGTTCC TGAAGTTTGA GCTGAAAACC ATTCCTAATG TCGCTGAAGT TGCATCCGTA
GGCGGCGTGG TTAAGCAGTA TCAGATCCAG CTTGACCCGG TAAAACTGAC GCAGTACGGC
ATCGGTCTGC CAGAAGTAAA ACAAGCTCTT AGCTCATCTA ACCAGGAAGC CGGTGGCTCA
TCTGTTGAAA TTGCTGAGTC AGAGTATATG GTCCGGGCCA GCGGTTATCT TCAGACTATT
GATGATTTCA AAAATATCGT CCTGAAAACG GGGGAAAATG GAGTACCTGT TTACCTGCGT
GATGTTGCCC GCATACAAAT GGGACCGGAA ATGCGGCGTG GTATCGCTGA GCTTAACGGT
CAGGGCGAAG TCGCTGGCGG AGTGGTGATC CTGCGTTCGG GCAAAAATGC ACGCGAAGTC
ATTACGGCGG TGAGGGATAA ACTGGACACG CTGAAGGCAA GCCTGCCTGA AGGAGTGGAG
ATCGTAACGA CATACGATCG CAGCCAGTTA ATCGATCGTG CGATTGACAA CCTCAGTTAC
AAGCTTCTTG AAGAGTTTAT CGTTGTTGCT GTCGTTTGCG CACTGTTCCT CTGGCATGTC
CGTTCTGCCC TGGTGGCGAT TATTTCTCTG CCACTTGGCC TGTGTATCGC CTTTATCGTC
ATGCACTTCC AGGGGCTGAA TGCCAACATT ATGTCGCTGG GAGGGATTGC AATAGCCGTC
GGAGCGATGG TGGATGCCGC CATCGTCATG ATCGAAAACG CGCATAAACG GCTTGAGGAG
TGGGACCATC AGCATCCCGG GGAACAGATT GATAATGCCA CCCGCTGGAA GGTTATCACT
GACGCCTCCG TTGAAGTGGG TCCAGCGCTG TTTATCAGCC TGCTGATTAT CACATTATCG
TTCATTCCTA TTTTTACCCT GGAAGGGCAG GAAGGGCGTC TGTTTGGTCC GCTGGCCTTT
ACAAAAACGT ATTCCATGGC GGGTGCAGCC ATACTGGCAA TCATTGTTAT CCCTATTCTG
ATGGGGTTCT GGATCCGCGG GAAAATTCCT GCTGAGACCA GTAACCCACT GAACCGGTTG
CTGATTAAAG CGTATCACCC GTTACTGCTC AGGGTACTAC ACTGGCCAAA AACAACCCTG
CTGGTTGCGG CTTTATCCAT TTTCACTGTT ATCTGGCCAC TGAGTCAGGT GGGCGGCGAG
TTTTTACCGA AGATTAACGA AGGTGACCTG TTGTATATGC CGTCAACGTT ACCTGGCGTG
TCTCCTGGAG AAGCTGCTGC GCTCTTACAG ACCACGGACA AACTAATCAA AACGGTGCCT
GAAGTGGCCT CAGTTTTTGG CAAGACCGGT AAGGCTGAGA CCGCCACGGA TTCTGCTCCG
CTCGAAATGA TGGAAACCAC CATCCAACTG AAACCTGAGG ATCAGTGGCG TCCAGGCATG
ACGATTGACA AGATTATTGA AGAACTCGAC AGGACCGTCC GTTTACCGGG TCTGGCCAAC
CTCTGGGTAC CGCCTATCCG TAACCGTATT GATATGCTCT CAACCGGCAT TAAAAGTCCG
ATAGGTATTA AGGTATCGGG TACTGTTCTG TCGGATATCG ATGTAACAGC ACAGAGTATC
GAAGCAGTCG CTAAAACCGT ACCTGGTGTG GTTTCCGCAC TGGCTGAACG ACTGGAAGGT
GGACGTTATA TTGATGTGGA CATTAACCGG GAAAAAGCTT CCCGGTACGG GATGACTGTG
GGCGACGTCC AGCTGTTCGT CTCTTCAGCA ATCGGTGGGG CTATGGTGGG TGAGACGGTT
GAAGGCGTGG CCCGGTACCC TATTAACATT CGCTATCCGC AGGATTACCG TAACAGTCCG
CAGGCGTTGA GAGAGATGCC AATCCTGACC CCAATGAAGC AGCAAATTAC GCTGGGCGAT
GTTGCCGATA TTAAGGTCGT TTCCGGACCA ACCATGCTGA AAACCGAAAA TGCCCGGCCA
GCCAGCTGGA TTTATGTTGA TGCCCGCGGC AGGGACATGG TGTCGGTGGT GAACGATATT
AAGACGGCCA TCAGTGAGAA AGTGAAACTG AGACCGGGGA CCAGTGTGGC ATTCTCAGGA
CAGTTTGAAT TACTCGAGCA CGCCAATAAG AAATTAAAAC TGATGGTACC GATGACGGTG
ATGATCATCT TCATCCTGTT ATATCTGGCA TTCCGCAGGG TTGATGAAGC CCTGTTGATC
CTGATGAGCC TGCCGTTTGC CCTGGTTGGC GGGATATGGT TCCTGTACTG GCAGGGCTTC
CATATGTCAG TGGCGACCGG AACCGGGTTT ATCGCCCTGG CCGGGGTGGC AGCAGAGTTT
GGCGTGGTCA TGCTGATGTA TCTGCGTCAT GCCATTGAAG CGCACCCGAA ATTGTCCCGT
AAAGAGACGT TCACACCGGA AGGCCTTGAT GAAGCCCTCT ATCATGGTGC CGTACTGCGT
GTCCGGCCGA AAGCCATGAC CGTGGCGGTG ATCGTTGCGG GTCTGCTGCC AATACTCTGG
GGAACCGGTG CAGGTTCAGA AGTCATGAGC CGTATCGCGG CACCCATGAT TGGTGGGATG
ATCACGGCTC CGCTGCTGTC CCTGTTCATT ATTCCTGCCG CCTACAAATT AATCTGGCTG
CGCAGACATA AAAAAAGCGT GTCCTGA
 
Protein sequence
MIEWIIRRSV ANRFLVMMGA LFLSIWGTWT IINTPVDALP DLSDVQVIIK TSYPGQAPQI 
VENQVTYPLT TTMLSVPGAK TVRGFSQFGD SYVYVIFEDG TDLYWARSRV LEYLNQVQGK
LPAGVSSEIG PDATGVGWIF EYALVDRSGK HDLSELRSLQ DWFLKFELKT IPNVAEVASV
GGVVKQYQIQ LDPVKLTQYG IGLPEVKQAL SSSNQEAGGS SVEIAESEYM VRASGYLQTI
DDFKNIVLKT GENGVPVYLR DVARIQMGPE MRRGIAELNG QGEVAGGVVI LRSGKNAREV
ITAVRDKLDT LKASLPEGVE IVTTYDRSQL IDRAIDNLSY KLLEEFIVVA VVCALFLWHV
RSALVAIISL PLGLCIAFIV MHFQGLNANI MSLGGIAIAV GAMVDAAIVM IENAHKRLEE
WDHQHPGEQI DNATRWKVIT DASVEVGPAL FISLLIITLS FIPIFTLEGQ EGRLFGPLAF
TKTYSMAGAA ILAIIVIPIL MGFWIRGKIP AETSNPLNRL LIKAYHPLLL RVLHWPKTTL
LVAALSIFTV IWPLSQVGGE FLPKINEGDL LYMPSTLPGV SPGEAAALLQ TTDKLIKTVP
EVASVFGKTG KAETATDSAP LEMMETTIQL KPEDQWRPGM TIDKIIEELD RTVRLPGLAN
LWVPPIRNRI DMLSTGIKSP IGIKVSGTVL SDIDVTAQSI EAVAKTVPGV VSALAERLEG
GRYIDVDINR EKASRYGMTV GDVQLFVSSA IGGAMVGETV EGVARYPINI RYPQDYRNSP
QALREMPILT PMKQQITLGD VADIKVVSGP TMLKTENARP ASWIYVDARG RDMVSVVNDI
KTAISEKVKL RPGTSVAFSG QFELLEHANK KLKLMVPMTV MIIFILLYLA FRRVDEALLI
LMSLPFALVG GIWFLYWQGF HMSVATGTGF IALAGVAAEF GVVMLMYLRH AIEAHPKLSR
KETFTPEGLD EALYHGAVLR VRPKAMTVAV IVAGLLPILW GTGAGSEVMS RIAAPMIGGM
ITAPLLSLFI IPAAYKLIWL RRHKKSVS