Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4297 |
Symbol | |
ID | 4475951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | + |
Start bp | 180422 |
End bp | 181807 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639720654 |
Product | copper/silver efflux system outer membrane protein CusC |
Protein accession | YP_863812 |
Protein GI | 117676236 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00173675 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAAT TAAAATTACT CAGCATTAGC ACGATATTCA TCCTGACCGG TTGTGTCTCT CTGGCACCTG AATATCAGCG CCCGGCAGCA CCGGTACCCC AGCAGTTTTC ACTGTCCCGA AACAGCCTGA TGCCAGCAGT GAATGGTTAT CAGGATACGG GCTGGCGTAA CTTTTTTGTC GATCCCCAGG TTACCCGGCT GATCGGGGAA GCCCTTGCTA ATAACCGTAA TTTGAGAATG GCTGCCCTGA AGGTTGAAGA GGCCCGGGCC CAGTTCAACG TCACGGATGC AGATCGTTAT CCCCAGCTGA ATGCCTCATC CGGGATCACC TACAGCGGTG GTCTGAAAGG CGACAAGCCG ACCACACAGG AGTACGACGC GGGTCTGGAA CTCCGCTATG AGCTCGATTT TTTCGGCAAG CTCAAGAACT TGAGTGACGC TGATCGCCAG AACTACTTTG CCAGCGAAGA AGCCCGTCGG GCTGTACATA TCCTGCTGGT CTCCAGCGTT TCACAAAGCT ATTTCAGCCA GCAACTGGCG TATGAACAAC TCCGTATCGC GCGGGAAACG CTGAAAAATT ACGAACAGTC CTATGCTTTC GTTGAGCAAC AGCTCGTGAC CGGGAGTACG AATGTGCTGG CGCTTGAACA GGCCAGGGGA CAAATCGAAA GTACCCGCGC TGAGATAGCC AAACGAGAAG GCGATCTGGC TCAGGCAAAC AATGCCCTGC AACTGGTGCT GGGAACGTAC CGTGCACTGC CGCCAGAAAA AGGGATGAAA GGCGGTGAGA CCGCGCCAGT TAAACTGCCA TCAAACCTGT CGTCACAAAT TTTGCTGCAG CGACCGGATA TTATGGAGGC GGAATACCAG CTGAAAGCTG CTGATGCGAA TATTGGCGCA GCGCGGGCGG CCTTTTTCCC GTCCATTACC CTGACCAGTG GCCTTTCCGC AAGCAGTACG GAGCTGTCCA GTCTCTTCAC GCCAGGAAGC GGAATGTGGA ATTTTATCCC TAAAATTGAC ATTCCTGTTT TTAATGCCGG CAGGAACAAA GCCAATCTCA AACTGGCAGA AATTCGCCAG CAACAGTCGG TGGTTAATTA CGAACAAAAA ATTCAGTCCG CCTTTAAGGA TGTTTCCGAC ACGTTTGCGC TGCGCGACAG CCTTAGCCAG CAACTTGAGT CACAGCAGCG TTATCTTGAT TCACTTCAGA TAACTCTCCA GCGAGCCAGA GGATTGTATG CAAGTGGTGC TGTCAGTTAC ATCGAAGTGC TGGATGCAGA ACGTTCCCTC TTCGCTACGC AGCAAACCAT TCTCGATCTT ACCTATTCCC GACAGGTTAA CGAAATTAAT CTGTTTACTG CGCTGGGTGG CGGTTGGGTA GAATAA
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Protein sequence | MFKLKLLSIS TIFILTGCVS LAPEYQRPAA PVPQQFSLSR NSLMPAVNGY QDTGWRNFFV DPQVTRLIGE ALANNRNLRM AALKVEEARA QFNVTDADRY PQLNASSGIT YSGGLKGDKP TTQEYDAGLE LRYELDFFGK LKNLSDADRQ NYFASEEARR AVHILLVSSV SQSYFSQQLA YEQLRIARET LKNYEQSYAF VEQQLVTGST NVLALEQARG QIESTRAEIA KREGDLAQAN NALQLVLGTY RALPPEKGMK GGETAPVKLP SNLSSQILLQ RPDIMEAEYQ LKAADANIGA ARAAFFPSIT LTSGLSASST ELSSLFTPGS GMWNFIPKID IPVFNAGRNK ANLKLAEIRQ QQSVVNYEQK IQSAFKDVSD TFALRDSLSQ QLESQQRYLD SLQITLQRAR GLYASGAVSY IEVLDAERSL FATQQTILDL TYSRQVNEIN LFTALGGGWV E
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