| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4296 |
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| Symbol | |
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| ID | 4475950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008573 |
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| Strand | - |
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| Start bp | 179552 |
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| End bp | 180232 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639720653 |
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| Product | DNA-binding transcriptional activator CusR |
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| Protein accession | YP_863811 |
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| Protein GI | 117676235 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000252174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATAT TGATCGTCGA AGACGAAATT AAAACAGGTG AATATCTCAG CAAAGGGCTT
AGAGAGGCAG GGTTCGTAGT GGATCACGCT GATAATGGTC TTACCGGATA TCATCTCGCC
ATGACAGCCG AGTATGATTT AGTCATTCTG GACATCATGC TGCCTGATAT GAACGGCTGG
GATATCATCC GGATGCTGCG CACTGCCGGA AAGGGTATGC CGGTCTTACT GCTGACGGCC
CTCGGCACGA TCGAACACAG GGTCAAAGGA CTGGAACTGG GTGCGGACGA TTATCTGGTT
AAACCCTTTG CGTTTGCCGA ACTGCTAGCC CGGGTGAAAA CCCTTCTGAG GCGGGGAAAC
ACGATGATCA CGGAAAGCCA GTTTAGGGTG GCTGGTCTCT CGATTGATCT CGTATCCAGA
AAAGTCAGTC GCGCCGGAAA CCGCATTGTG CTCACCAGTA AAGAGTTCAG CCTGCTGGAA
TTTTTCATTC GCCATCAGGG AGAGGTTCTT CCCCGTTCCC TGATTGCCTC TCAGGTCTGG
GACATGAATT TTGACAGCGA CACTAACGCG ATTGATGTCG CCGTAAAGCG ACTCCGCGCT
AAAATAGACA ACGATTACGA GACAAAGCTG ATCCAGACAG TCCGGGGCGT GGGCTATATG
CTGGAGGTCC CGGATGCATA G
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| Protein sequence | MKILIVEDEI KTGEYLSKGL REAGFVVDHA DNGLTGYHLA MTAEYDLVIL DIMLPDMNGW
DIIRMLRTAG KGMPVLLLTA LGTIEHRVKG LELGADDYLV KPFAFAELLA RVKTLLRRGN
TMITESQFRV AGLSIDLVSR KVSRAGNRIV LTSKEFSLLE FFIRHQGEVL PRSLIASQVW
DMNFDSDTNA IDVAVKRLRA KIDNDYETKL IQTVRGVGYM LEVPDA
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