Gene Shewana3_4288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4288 
Symbol 
ID4475942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp172099 
End bp172812 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content44% 
IMG OID639720645 
Productcopper resistance B precursor 
Protein accessionYP_863803 
Protein GI117676227 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3667] Uncharacterized protein involved in copper resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.28688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA CGAATTTAGT GGCATTGGGA CTGTTGAGTC TGAGCGCCTC ATTGGCTAGC 
TCAGCTGTGT TTGCCGGCGG TAATGATGAT CCTCTATTAA CAAAAGTCAT GCTGGATCAA
TTTGAAAAAG GCGTGGATCC GCAAGATCCT ACCCAGTTTA GTGCACAAGC CTGGTTAGGT
TACGATTTGA ATAAGTTGTG GCTTAAAACC GAAGGTGAAT ATTCAAATAG TGATAAGCAA
GACCTTGAAA TTCAGGCTCT TTACAGTAAG CCCATCGCAC CATACTGGGA TGTACAATTC
GGTATTAAAA CCGATATCAA ACCGACGCCG AACCGTAATT GGGCTGTGAT TGGGGTTCAA
GGGTTAGCGC CATATTTTTT TGATATTGAC GCGGCCTTAT TCATCGGTGA ACAAGGCCGT
ACGGCTATGC GGTTGAGTGC GGAATATGAA CTGTTAATCA CTCAAAAATT GATACTCACA
CCTGAAGTAG AAGTTAATTT ATTTGGTAAG GACGATGCTG AACTTGGAAT AGGCTCAGGC
TTATCTGACG TCAGTGCAGG GCTGCGATTG AGATACGAGA TTGTTCGAGA GTTCGCACCC
TATATCGGTG TTGATTGGCG TCAGAAGCTC GGTAATACCG CCGATTACGC CCGAAGTGAA
GGGGAAGATA CACAAGAAAC CCAGTTTGTT ATTGGTTTTA GCGCGTGGTT CTAA
 
Protein sequence
MNKTNLVALG LLSLSASLAS SAVFAGGNDD PLLTKVMLDQ FEKGVDPQDP TQFSAQAWLG 
YDLNKLWLKT EGEYSNSDKQ DLEIQALYSK PIAPYWDVQF GIKTDIKPTP NRNWAVIGVQ
GLAPYFFDID AALFIGEQGR TAMRLSAEYE LLITQKLILT PEVEVNLFGK DDAELGIGSG
LSDVSAGLRL RYEIVREFAP YIGVDWRQKL GNTADYARSE GEDTQETQFV IGFSAWF