Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4247 |
Symbol | |
ID | 4475840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | - |
Start bp | 122362 |
End bp | 123075 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639720604 |
Product | TatD-related deoxyribonuclease |
Protein accession | YP_863762 |
Protein GI | 117676186 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.555643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000153731 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCATTGCC ATCTTGATCT TTATCCCGAT CCATTCAAAG TGGCTCAGGA GTGTAAACAT CGTGGAACCT ACGTGTTATC CGTGACAACA ACTCCCAGGG CCTGGGAAGG CAGTAAGAGG CTTGAAAATA ATTACCATCG AATTCGCACT GCTTTAGGCC TTCATCCGCA AATCGCACAT CAAAGATCAC ATGAGTTAGA ACTTTTTGAT GCATTACTTT CGGAAGCTAA GTACGTGGGA GAGATAGGAC TCGATGGAAG TAGTGGTTTT AAAGAGCATT GGGACGTTCA GCTAAAGGTA TTTCGCCATA TACTCAGATC TGTTAATCAT GCAGGCGGAC GGATCATGAG CATTCACAGC CGTGCCAGTG CAGTAGAAGT ATTGAATGAA CTTACTGGTA TTGACGGTAT CCCTGTATTG CACTGGTTTA CTGGGACAAA AAGCCAACTA ATGAGAGCGA TAGATATTGG CTGTTGGTTT TCAGTTGGGC CAGCAATGCT CAGTACTAAA AAAGGAGTTG AATTTGCTTC AATAATTCCC CGTCACCGTA TTCTGACAGA GACAGATGGA CCATTTGCTA AACATTTAAC TAAACCACTT TTTCCTTGGG AAGTTGATTT GGCTACTAAG CAGTTAGCGG AAATTTGGCA GTGTGATGAA GTTGAGGCAA ATGCTATGAT CATGTCAAAT TTTAATTGTT TGGTACGAAC GTAA
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Protein sequence | MHCHLDLYPD PFKVAQECKH RGTYVLSVTT TPRAWEGSKR LENNYHRIRT ALGLHPQIAH QRSHELELFD ALLSEAKYVG EIGLDGSSGF KEHWDVQLKV FRHILRSVNH AGGRIMSIHS RASAVEVLNE LTGIDGIPVL HWFTGTKSQL MRAIDIGCWF SVGPAMLSTK KGVEFASIIP RHRILTETDG PFAKHLTKPL FPWEVDLATK QLAEIWQCDE VEANAMIMSN FNCLVRT
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