Gene Shewana3_4242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4242 
Symbol 
ID4475966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp116180 
End bp116785 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content44% 
IMG OID639720599 
Producthypothetical protein 
Protein accessionYP_863757 
Protein GI117676181 
COG category[S] Function unknown 
COG ID[COG2958] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000990305 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACCC GAGTAGAAAT GATTATAGAA ACGCTTAAGG CGCATCCTGA GCAAAAATTT 
ACTGCTCGGG ATTTAGCCAA AGTGTTCATT GAACGCTATC CAGTCGAGAT GGCAGAAAAG
CAAACCAATC CAAGATATGA CACCACTGAA AAGTTAATCG CACAACTTGC GGCCGAAATC
GGTGGTGAGC GCACAGTTGC CGCAAAAAAA GTGTGTCCTA ATGTGGCAAC AAGGGATAAA
CCGAGACCTC GTATTTATTT TTGGAATGCG AATCCTGAAC TGGACACGGT CGAATTGTCG
ACAGATAGTG AAGATACCGA TGTTCCAGAA GTGAATACGC CTCTCGCTGT TCAAAACTTC
AGTGAACATG ATTTATATCC ATTATTAATC GAATTTTTAA ATAAAGACCT TGGGCTGTAT
TGCCAGCGCA TTGATGAACG AAAGTCGAAA AACTCACATG GGAATGGCGG GAACCATTGG
TTGCACCCTG ATGTAGTGGC TCTTGAGCCT CTCGACCAAG GCTGGGATGA AATTGTGCGC
AGTTGTGTAC GTAGCGGCAA TCATAGCTCG GTTCGTTTAT GGTCGTTTGA AGTTAAAAGC
ACCTGA
 
Protein sequence
MATRVEMIIE TLKAHPEQKF TARDLAKVFI ERYPVEMAEK QTNPRYDTTE KLIAQLAAEI 
GGERTVAAKK VCPNVATRDK PRPRIYFWNA NPELDTVELS TDSEDTDVPE VNTPLAVQNF
SEHDLYPLLI EFLNKDLGLY CQRIDERKSK NSHGNGGNHW LHPDVVALEP LDQGWDEIVR
SCVRSGNHSS VRLWSFEVKS T