Gene Shewana3_4236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4236 
Symbol 
ID4475960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp109046 
End bp109474 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content40% 
IMG OID639720594 
Producttransposase IS200-family protein 
Protein accessionYP_863752 
Protein GI117676176 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00495198 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGTGTAC GCAACAAAGA ATTACTTCAA GACTACCTTA AAAAAAGGCA CAGCGTGAGC 
AAGTTGGTTG TTCATCTAGT GTTTACAACG AAATACAGAC GCAAGTTGTT TACGGGAGTT
ATGATCGAGC AATTAAGAGA GGCTTTTGAG TCAGCTTGTG TAAAACTTGA ATGTGAATTG
ATAGAAATGG ATGGAGAACA GGATCACATT CATTTACTGA TCTCATACCC TCCGAAACTT
TCAATTAGCG TAATGGTTAA CAACTTGAAA GCAGTTTCAT CTCGCATGTT GCGACGACAA
AATACGCACC TTACGAGACA GAGTAAAAGC TCCGCTCTAT GGTCTCGTTC ATACTTTGCT
TGCACTGCTG GCGGTGCAAC AATTGAAACA TTAAAAGCCT ATGTAGAGAG TCAATCGACT
CCAGATTAA
 
Protein sequence
MSVRNKELLQ DYLKKRHSVS KLVVHLVFTT KYRRKLFTGV MIEQLREAFE SACVKLECEL 
IEMDGEQDHI HLLISYPPKL SISVMVNNLK AVSSRMLRRQ NTHLTRQSKS SALWSRSYFA
CTAGGATIET LKAYVESQST PD