Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4236 |
Symbol | |
ID | 4475960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | + |
Start bp | 109046 |
End bp | 109474 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639720594 |
Product | transposase IS200-family protein |
Protein accession | YP_863752 |
Protein GI | 117676176 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00495198 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGTGTAC GCAACAAAGA ATTACTTCAA GACTACCTTA AAAAAAGGCA CAGCGTGAGC AAGTTGGTTG TTCATCTAGT GTTTACAACG AAATACAGAC GCAAGTTGTT TACGGGAGTT ATGATCGAGC AATTAAGAGA GGCTTTTGAG TCAGCTTGTG TAAAACTTGA ATGTGAATTG ATAGAAATGG ATGGAGAACA GGATCACATT CATTTACTGA TCTCATACCC TCCGAAACTT TCAATTAGCG TAATGGTTAA CAACTTGAAA GCAGTTTCAT CTCGCATGTT GCGACGACAA AATACGCACC TTACGAGACA GAGTAAAAGC TCCGCTCTAT GGTCTCGTTC ATACTTTGCT TGCACTGCTG GCGGTGCAAC AATTGAAACA TTAAAAGCCT ATGTAGAGAG TCAATCGACT CCAGATTAA
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Protein sequence | MSVRNKELLQ DYLKKRHSVS KLVVHLVFTT KYRRKLFTGV MIEQLREAFE SACVKLECEL IEMDGEQDHI HLLISYPPKL SISVMVNNLK AVSSRMLRRQ NTHLTRQSKS SALWSRSYFA CTAGGATIET LKAYVESQST PD
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