Gene Shewana3_4229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4229 
Symbol 
ID4475953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp103338 
End bp103865 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content47% 
IMG OID639720587 
Productsingle-strand binding protein 
Protein accessionYP_863745 
Protein GI117676169 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.201329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0453464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCAG TTAATAAAGT TATCATTGTT GGCAATATCG GTCAGGAAAT TGATTTTAAG 
ACACTTCCTA GCGGTACAAG CGTAGCAAAT TTCAGTGTGG CCACGAGTGA CACTTGGAAA
GACCAACAGG GTGTTCAGCA AGAGGTGACC GATTGGCACA AGATTGTTGT TTGGGGCAAG
CTGGCTGAGA TTATCAATCA ATACGGTGGA AAAGGCCGTC AGGTCTACAT CGAAGGCAAG
CAAAAGACTC GCAAATATAA AGATGCCAAT GGCCAAGAAC GCTACACAAC AGAAGTTGTC
GTGGACTTTG ATGGTCAAGT ACAGCTTTTA GGTGGTTCAC CAAAGGATAA TGCAGGCCAA
AGCTCTGGTT ATCAGCAAAA CGCACCACAG CAGCAAGGTT ACCAGCAAAA CGCACCGCTG
CTGCATGGAT ACCAGCAAAA TGCACCGCAG CAAGGCGGTT ATCAGGCGCA ACCACAGGGC
GGTCACCAAC AAAATACTCA GCAACAGGCT TATAACTACC ACCGTTAA
 
Protein sequence
MGSVNKVIIV GNIGQEIDFK TLPSGTSVAN FSVATSDTWK DQQGVQQEVT DWHKIVVWGK 
LAEIINQYGG KGRQVYIEGK QKTRKYKDAN GQERYTTEVV VDFDGQVQLL GGSPKDNAGQ
SSGYQQNAPQ QQGYQQNAPL LHGYQQNAPQ QGGYQAQPQG GHQQNTQQQA YNYHR