Gene Shewana3_4228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4228 
Symbol 
ID4475952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand+ 
Start bp102690 
End bp103265 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content45% 
IMG OID639720586 
Producthypothetical protein 
Protein accessionYP_863744 
Protein GI117676168 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.428737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0247109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAT CCAGTTCTAG CCAGTTAACC GATTTACTGT CTTCCGTTTG GCCCAATAAC 
GAAGTTAACG CCTTACAAGG TCTGCTTTCA TTGTTTGACA CGTTAATTAA TCACGGCGCC 
AGAGTATGCG AGCAGCCAAC GCCGGATATT ACTCCCGCTC AAAAGACGTT GTTTGTTCAG 
GCTGTCTATT CAGAGTTATC GAGCGGTAAT CTCGACCCCA TTGGAAAAGC AATTAGTTTT 
TATGGTGCCG ATGCAGGGTT TACTCACGAC AATCAGGATT TCCGCTTGTG TATCCATGCC 
GGTGATCGTC AGCCATTAAC TGTGAAATCG TATTCATCAT TGCAGTCCGG TTCGGGGCTG 
GATGTACAGG GTTATCTGTT ACAGCTGGCT AACGGTTGTC AAAGCAACAT CGTAAACGAC 
CCATTTCATT CTCTCTGGAT ACGACTAGAA GATCCGAGTC GTAGCAAGCT AATTGCCGCA 
TACGTGCAGA TTACTCTGCT AATGAAAGCG ATTTCTAAGC GAGTAGGTAG GGCGGTATCA 
CCGTTTTGTG TGGAACTGGT GGCAATAAAT ATTTAA
 
Protein sequence
MKVSSSSQLT DLLSSVWPNN EVNALQGLLS LFDTLINHGA RVCEQPTPDI TPAQKTLFVQ 
AVYSELSSGN LDPIGKAISF YGADAGFTHD NQDFRLCIHA GDRQPLTVKS YSSLQSGSGL 
DVQGYLLQLA NGCQSNIVND PFHSLWIRLE DPSRSKLIAA YVQITLLMKA ISKRVGRAVS 
PFCVELVAIN I