Gene Shewana3_4225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4225 
Symbol 
ID4475984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp97320 
End bp98393 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content41% 
IMG OID639720583 
Producthypothetical protein 
Protein accessionYP_863741 
Protein GI117676165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.699695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.542878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATCTA ATGCTAAAGA AGCGCGTAAG CGCGTTCCAT TTGGCAGAGC CTTAGTTGAC 
TCTGCTGGTT TAAATAGTCA ATTACATCCA GAAACTACTG AGTCTGCATT TGTTGCTAAT
ACTGATGTAC TGAACGACTC TGCTACTTCA ATTAAAATTA AATTGTCCAG TGGGCGTACT
CTTACATTCA CTCGTAAGCA CTTAACGGCG GAAGAACTCA AAACAAAGTC TTTCGTACAC
CCATTTAACC CGCGTCCAGC CGGTGATGTA AAACCAAATT CATTACTGCG GATCCGTAAA
ACTATTGCAA AGGTGCAATT TTCTGATGCG TTGGCAACAC GGGATTCAAC TGGTTATCAC
TTGTTTGATG GTCAGCGCCG ACGTATGGCA GCAATCTTAG AGAATGCTGG ATTAAATGTG
CTGTATACCG ATTTTGTACT AACAGAAGAA GAAGTTCACG AAATCGTTAA ATACGTCCAA
ACCTCTGAAA AGTATAGTTA TCGAGATGCG GGTTTTCAGA TGAAAAAGGC ACTCGCGAAA
AACGAGCTCG AGATTGCCAA CAACAAAACA GTTAAGTTAT CTCTGAGAGA GCTAGCTGCT
CAATTCGACG TATCTTATTC GTATGTAACG AGAGCACTTA AAGCCGCAGA AATTCCAGAT
GAAATTATTG AGTTGTTCCC CTGCCCTTCT GCTTTAAGTT CAACACAAAT TATGGCTCTT
TATGACATTA CTCAAAAGCA TCAACTTTCA GCTTTATTGA GCGAGCAGTT ACTTGAGAAA
ATTGAAAACA TTTGCATCGA TGCAAATGAA GGCGAAACAT CGGTAGCGGG ACTATTTGAT
GTCGATGGCC AGAAAAACAG TCAGATACTG AAGGTGTTCG AAGACTTTGA TAAACAATCA
AAACCCAAAA AGCTGGCAAA TGATAAAATT GCCGAGGGTG ACGACCGCAA TCGTTGGGCT
AAATTATCGA CCCAAAATCG AAAGACCAAG GTCGAAGTAA CAAGATTGTC GGAGCAAGAG
ATTGAGAAGC TAAAACAATT CTTAATTGAT TTAGTAGAAG CAAAAAACCA GTAG
 
Protein sequence
MVSNAKEARK RVPFGRALVD SAGLNSQLHP ETTESAFVAN TDVLNDSATS IKIKLSSGRT 
LTFTRKHLTA EELKTKSFVH PFNPRPAGDV KPNSLLRIRK TIAKVQFSDA LATRDSTGYH
LFDGQRRRMA AILENAGLNV LYTDFVLTEE EVHEIVKYVQ TSEKYSYRDA GFQMKKALAK
NELEIANNKT VKLSLRELAA QFDVSYSYVT RALKAAEIPD EIIELFPCPS ALSSTQIMAL
YDITQKHQLS ALLSEQLLEK IENICIDANE GETSVAGLFD VDGQKNSQIL KVFEDFDKQS
KPKKLANDKI AEGDDRNRWA KLSTQNRKTK VEVTRLSEQE IEKLKQFLID LVEAKNQ