Gene Shewana3_4219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4219 
Symbol 
ID4475978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp91722 
End bp92450 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content47% 
IMG OID639720577 
Producthypothetical protein 
Protein accessionYP_863735 
Protein GI117676159 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.650672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.513979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACTC GAGCATTAAA ATTAAGCATG GTCGCTGTTA GTTTGGCAAC TATTTTTGGA 
TGTCAATCGA TGTTCGAAAC GGGTGAGGAG CCTACGGTTT GTGTAAACAC TCAAAACAGC
GGATTACCCT GTACCACCAC TAGAGAAATT CTGAAACTGG CTGATACGCC TGGCGGCATT
GAGGCAGAAA AAGCGCGGCG AGCAGCTGAA AGCGATGAAG ATTGCCCAGA CTGTAAAGTA
CCTAAAAAGT CAGTGGCTAA CTCCGGCGCC ATGGCCGGCT ATGGCTTGGA CGCTAACGGC
CAACCAATCA CCCTGAATGA AGTCACTAAT GCTTACATGT TTACGGCTGA TAACAACCGT
GCATTACCCG CTCCAGAGCC TATCGCTGTT CGGCAGGCGC CCAAAATGCT TCGTGTTGCA
TTTGCTCCAT GGCAAGACGA CAAAGGCCGT TTACAGAACG TCGGTTATGT CTATACCGAA
ATTGAAACCC GTAAATACAC CTATGGCCGT GAAGCATTCA ACATGCCTGC TCAAATCACT
CCGCTTTATA TTCGTCAGCA ATCCATTGAA GAAGAGCGAA GGGGTAACCC AAGCGAAATT
AACGGAGTTG GCATTAAGAC AGGTAAACCT GGGCGTAATA ATTTCAATGC TGATCTAGAA
GCGGCAAAGG CCACTTTGGA TCAAGCGCCA AAAGCTGTTC AAGAAGCGTT ACGCGCTAAC
GGCAATTAA
 
Protein sequence
MITRALKLSM VAVSLATIFG CQSMFETGEE PTVCVNTQNS GLPCTTTREI LKLADTPGGI 
EAEKARRAAE SDEDCPDCKV PKKSVANSGA MAGYGLDANG QPITLNEVTN AYMFTADNNR
ALPAPEPIAV RQAPKMLRVA FAPWQDDKGR LQNVGYVYTE IETRKYTYGR EAFNMPAQIT
PLYIRQQSIE EERRGNPSEI NGVGIKTGKP GRNNFNADLE AAKATLDQAP KAVQEALRAN
GN