Gene Shewana3_4217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4217 
Symbol 
ID4475976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp88272 
End bp88994 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content44% 
IMG OID639720575 
Productputative signal transduction protein 
Protein accessionYP_863733 
Protein GI117676157 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.420533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.975868 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAACT ACACCCTCTC GGCTAAATCA ATAACTGATG CTACCCAAAG CGCTCAGTTT 
GATTTACTTA TCAAAAATGT TCCCGTGCCG GAGATTAGGG AAATTTTGAA GCACGACGAT
CCCATTAATG AACTTTACCG ACTTGTTCGT AATGATGCTG CTCTCGCTGC GTTGTTCCTT
CGTGTAGCAA ATTCAGCTTC ATTACCCGTC GTTAAAAACT TTGATGATTT AAAACGTGCA
ATCACCAAAC TAGGAACGCT CAGAAGTGTC AATCTGATCA TTACCTACAT GCTAAGACAA
CTGTTGCCTA GCTCCGCTTA TGACGTCAGT ACACAACTCA TAGACTATTC AATCGATACC
GCCATCGCAC TCGACAGCAT TCAGCGCAAG CCCAGTTCGT ATATCACAGG CATTGCGTTA
TTCGGTGGAG CTATGCTGGT AGCTGGTTAC GCTGATCACA TGGGTATTAA TGTCACAATT
GGTGAATGCA CAGCACTCAA CCTTGAACTA CTTCCTGTGT TCATTCGACA CTGGTCATTC
CCTGAAGAAA CACTGCAAGC AATTGAGCTG TATCTTGCCA ATGATCATTC GAGTATCGCA
TTAGCGATTT CCGCTGTTGC CCATAAACAT CGGTTATCCC CCTTCCCTGG AGTAGATTCG
AGCCTCCCTG AGAGACAGAT TATAGAAGTT GTTTCCAGTA TCAACGCTAA TCTATTCTTT
TAA
 
Protein sequence
MVNYTLSAKS ITDATQSAQF DLLIKNVPVP EIREILKHDD PINELYRLVR NDAALAALFL 
RVANSASLPV VKNFDDLKRA ITKLGTLRSV NLIITYMLRQ LLPSSAYDVS TQLIDYSIDT
AIALDSIQRK PSSYITGIAL FGGAMLVAGY ADHMGINVTI GECTALNLEL LPVFIRHWSF
PEETLQAIEL YLANDHSSIA LAISAVAHKH RLSPFPGVDS SLPERQIIEV VSSINANLFF