Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4217 |
Symbol | |
ID | 4475976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | + |
Start bp | 88272 |
End bp | 88994 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639720575 |
Product | putative signal transduction protein |
Protein accession | YP_863733 |
Protein GI | 117676157 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.420533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.975868 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAACT ACACCCTCTC GGCTAAATCA ATAACTGATG CTACCCAAAG CGCTCAGTTT GATTTACTTA TCAAAAATGT TCCCGTGCCG GAGATTAGGG AAATTTTGAA GCACGACGAT CCCATTAATG AACTTTACCG ACTTGTTCGT AATGATGCTG CTCTCGCTGC GTTGTTCCTT CGTGTAGCAA ATTCAGCTTC ATTACCCGTC GTTAAAAACT TTGATGATTT AAAACGTGCA ATCACCAAAC TAGGAACGCT CAGAAGTGTC AATCTGATCA TTACCTACAT GCTAAGACAA CTGTTGCCTA GCTCCGCTTA TGACGTCAGT ACACAACTCA TAGACTATTC AATCGATACC GCCATCGCAC TCGACAGCAT TCAGCGCAAG CCCAGTTCGT ATATCACAGG CATTGCGTTA TTCGGTGGAG CTATGCTGGT AGCTGGTTAC GCTGATCACA TGGGTATTAA TGTCACAATT GGTGAATGCA CAGCACTCAA CCTTGAACTA CTTCCTGTGT TCATTCGACA CTGGTCATTC CCTGAAGAAA CACTGCAAGC AATTGAGCTG TATCTTGCCA ATGATCATTC GAGTATCGCA TTAGCGATTT CCGCTGTTGC CCATAAACAT CGGTTATCCC CCTTCCCTGG AGTAGATTCG AGCCTCCCTG AGAGACAGAT TATAGAAGTT GTTTCCAGTA TCAACGCTAA TCTATTCTTT TAA
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Protein sequence | MVNYTLSAKS ITDATQSAQF DLLIKNVPVP EIREILKHDD PINELYRLVR NDAALAALFL RVANSASLPV VKNFDDLKRA ITKLGTLRSV NLIITYMLRQ LLPSSAYDVS TQLIDYSIDT AIALDSIQRK PSSYITGIAL FGGAMLVAGY ADHMGINVTI GECTALNLEL LPVFIRHWSF PEETLQAIEL YLANDHSSIA LAISAVAHKH RLSPFPGVDS SLPERQIIEV VSSINANLFF
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