| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4215 |
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| Symbol | |
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| ID | 4475974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008573 |
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| Strand | - |
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| Start bp | 85589 |
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| End bp | 87583 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639720573 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_863731 |
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| Protein GI | 117676155 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1200] RecG-like helicase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00111168 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACA CGTCTTTAGA GCAGTTATCC AAGTTTGGCA TAACTGAGTT ATGGCAAGTT
GGACTTGTCA TGCCTCTGCA ATACAAAGAT TTACGCCTTG TTCAATATGA CTTGAATCCC
TATCAACGCT TCTCTGGGAT GACACTTTTC GGCGGTCATA TTCACTCTGT ATCTGACATC
AAGTTAGGAC GCACTAAAAA ACGCAGTCCC TTCATCATTG TTGAGCTGAC AGACCAACTG
GGGTTTCGAC TTAAAACCTT CGTTTACGAC ACAGCTGAAA ATCTAAAGTC GTTGAGCAAC
GGGCTCGCGA TGGCTAATCA GCATCACCCT ATCTATGTCT ATGGCTTACC GGAATATCAA
AACCAACAAC TGATCTTAAA AAATCAGGAG TTTATTGCCC CCGATGATTT AGGGCGTTTG
CATGTGTGCT ATGAACTGGC CAAGGGAAGG AGCAAAGCGG AACCCAATGT AATCGATTTT
CTCAGCCGCT TACTGTCAGA ACGTGATGTT ATCAAGGAGT GTGCTGACAA GATTAGAGAG
CTGCTTTCAG CTACCACCGT AAGTAACAAA CGACTAAAGC AATTTCTGGG TGCAGCCCCG
AGTGACAACA TCGAGCAGAT GTTACAGGAG ATCCATTTCC CCGATTGTGT TCAACGAGGT
TACGCACGGA TTCGGCAAGT CAGTAAGTTA GCAGCAGTCC TCATTGGTGC GGAGGCAAAG
GAATTGGCGT CACAGTGGGG AGTAAAGCGT GTCCCGTTGC ATTTTGAGTC AGAGGCGATA
GATAACCGCA TTAAATCGTT ACCATTCCAA ATGACCGAGG AACAAAAATC CGCGGCATTT
AGTATGGTCA CGCAAATGAC CTCGGCAGTA TCTCAACACA TGATGTTAAT TGGTGACGTT
GGCACCGGAA AAAGCTGTGT GATTGGCACC TGTGCCGCCT CAGTTGTGGA TGCCGGTGGG
CGAGTGGCCA TTATGCTGCC TACTTCGAAT TTAGCGCGTC AGTTACATAG AGAGTTCTCT
GAGTATTACC CTGACATCAG CCCGACGTTA GTCATTGAAG GGGAGATCAT TGAAGAGATT
TCCCAATGTC GAATGTTGAT TGGTACCACG GCGATTTTAC ACAAACAGTG GCCATTCACA
TTTGATCTGA CCGTCGTGGA TGAACAGCAC AAGTTTTCAG TTGAACAGCG CGAGCTGTTT
TGCGCTGACG GGGCGCATTT ACTGGAATCG ACAGCAACCC CAGTACCGCG AACAGCGGCT
TTGCTAAAAC ATGGAGTGCT GAAGGTGTAC GAGCTAAAGC ATTGCTTCGT AGATAAGCGT
ATTGAGAGTC GTTTGTTAGA GCATTACGCA GGTCGAGACC TGGCAATAAG AGCGTTAGCG
ACGCTTCAAA GCGGCCAAAA GTTATTGATT GTTTGCGCCC TAAAAGATGA AAGCAAGTGT
GAGGCATTTG CGGATATTCA GAATGCGACA GAGACATACG AGAAATGGTG CCGATTCATC
CATAGTAATC GCCACGTCCT ACCGGATGGT AGCGGGGTTG TTCTGGCGCA TGGAGGGCTA
ACAAACGAAG AGAATGCAGC TGCAATCGAT GCGCTCAATA CGGGTGATGC AAACGTGCTG
GTCGCGACGA CATTAGTTGA AACTGGGCTG ACTATTAAAG GGTTAACCCA CTGCATTGTG
ATGAATCCAG ACAGGCTAGG TCTTGTCCAA CTCCATCAGC TTAGAGGGCG CTTAGCAAGG
CACGGAGGGG TAGGGTACTT TGATTTACTG TTACCCCCTG AAATAAGCCC AAAATCAAAG
GATAGGCTTG AATTAATTTC TCAAATTTCA CATGGCGTGA CGCTAGCGAT TGAGGACATG
AAACTGAGAG GATTTGGCGA TTTAACCAAA TCAGGTCGCT CGCAAACGGG AGTTAATCAG
CGATATTTGT TCGGTTACAA AATCAATCTT GATGATTTAA ACGATGCAAT TGAGTTGATT
GATACCTCAA GTTAG
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| Protein sequence | MTDTSLEQLS KFGITELWQV GLVMPLQYKD LRLVQYDLNP YQRFSGMTLF GGHIHSVSDI
KLGRTKKRSP FIIVELTDQL GFRLKTFVYD TAENLKSLSN GLAMANQHHP IYVYGLPEYQ
NQQLILKNQE FIAPDDLGRL HVCYELAKGR SKAEPNVIDF LSRLLSERDV IKECADKIRE
LLSATTVSNK RLKQFLGAAP SDNIEQMLQE IHFPDCVQRG YARIRQVSKL AAVLIGAEAK
ELASQWGVKR VPLHFESEAI DNRIKSLPFQ MTEEQKSAAF SMVTQMTSAV SQHMMLIGDV
GTGKSCVIGT CAASVVDAGG RVAIMLPTSN LARQLHREFS EYYPDISPTL VIEGEIIEEI
SQCRMLIGTT AILHKQWPFT FDLTVVDEQH KFSVEQRELF CADGAHLLES TATPVPRTAA
LLKHGVLKVY ELKHCFVDKR IESRLLEHYA GRDLAIRALA TLQSGQKLLI VCALKDESKC
EAFADIQNAT ETYEKWCRFI HSNRHVLPDG SGVVLAHGGL TNEENAAAID ALNTGDANVL
VATTLVETGL TIKGLTHCIV MNPDRLGLVQ LHQLRGRLAR HGGVGYFDLL LPPEISPKSK
DRLELISQIS HGVTLAIEDM KLRGFGDLTK SGRSQTGVNQ RYLFGYKINL DDLNDAIELI
DTSS
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