Gene Shewana3_4214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4214 
Symbol 
ID4475973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp84628 
End bp85533 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content49% 
IMG OID639720572 
Producthypothetical protein 
Protein accessionYP_863730 
Protein GI117676154 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000071573 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.744992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAC AATCGTTAAG TAAAAAATCG TTCATCGCAT TTATTGTTAT CTTGGCTCTT 
GCCCTTCTCG TTTGGGTAGT GAGCCAGTTC AACAGCTATA AAACATCACT ACCAACGGGT
GTCGCCAAAG ATGGCCCTCC GGCCCTAGCA ACTTTGTTAA GCAGTAACGC CAATAACAAA
GTGATCCAGA AATGGAGTGT CACCGACGGT TCGCAAAATA TCACGGGTTG GCTGGTGGAT
CTGAGTGGCC AAAAACAAAT TTATTGGAGC ACGGGCGACT TTGTTATTGC TGGTGGTCTG
GTGGATGCGA ATGGCGTCAA CTTAACGGAG CAGTGGGCGA CGACGCTGGG CATCTCCGAA
GCCGATAGGA ATCAGCCACA ACAAGCAGGT CGAGCACAAC GCGCACCTGT TGCACAGCAA
ACTTACACTG AGCAGGATTG GCAAAGTCTC ACTGCGGCGA AATACATTCA ACTGGGCTAT
GAACAAGCGT CAGCTGAGAA AGCGATTTAT GTATTCTTTG AACCCTTCTG TAGTGCTTGC
AGTAGCTTAC TCGCACGTTT GAAACCCGAG ATTGAAAGCA AACAGTTGGA TGTGCGCTTG
GTGCCGTTAG CGTGGATCAG CGCCAACTCT GTCCCAGCAA TCCAAGCCAT GATTGATGGC
GGTAAGGACG CGGTGTGGAA GCACGAAGAG GCGAAGCAAA CTAAAGCTGC TTATGCCACT
GCAACCCCAA CCCCAGAAAC TAAGATGGCC ATCATCCAAA ACTCTGAGCT CATGGGTACA
CTGGGCATCC AAGGTACGCC GACGCTGTTT TATCGCAATG GTGGTGAAAT GGTCAAAGTG
GTGAATAACT TTGCCGCAAT CTCCCAAGCC ATAAACTCGC TACAACTCAC CGCATCAGTC
AATTAA
 
Protein sequence
MKQQSLSKKS FIAFIVILAL ALLVWVVSQF NSYKTSLPTG VAKDGPPALA TLLSSNANNK 
VIQKWSVTDG SQNITGWLVD LSGQKQIYWS TGDFVIAGGL VDANGVNLTE QWATTLGISE
ADRNQPQQAG RAQRAPVAQQ TYTEQDWQSL TAAKYIQLGY EQASAEKAIY VFFEPFCSAC
SSLLARLKPE IESKQLDVRL VPLAWISANS VPAIQAMIDG GKDAVWKHEE AKQTKAAYAT
ATPTPETKMA IIQNSELMGT LGIQGTPTLF YRNGGEMVKV VNNFAAISQA INSLQLTASV
N