Gene Shewana3_4212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4212 
Symbol 
ID4475971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp79601 
End bp80062 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content45% 
IMG OID639720570 
Producthypothetical protein 
Protein accessionYP_863728 
Protein GI117676152 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00102749 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTTC AACAATTACG TGAGTTCAGA TTAAAACCTA AAGTACATCA ATCTATCTGG 
GCTAAAGTGG GGTTGCCTGC TGGCGAAGGC CCTGTGCTAA GTGACGCAAT TAATCATGGG
TTTAGTATTG ATGTTGTGAA TCGCTTTGCC GAAGCCGTTT CCATGCCCGT TACGAACCTT
GTCCAGTATG CCGGTTTAAG CCGGGCAACC TTCGCCCGTC GGGTAAAGGA TAAAGAACAT
CGACTGAAGC CTAGTGAAAG CGAAGCGTTT GCACGGATGA TACGAATGTA TGAAGCAGCA
ACTTTGATGC TTGGTGGAAA CAAGGCAGAT GCTATTCAAT GGCTCAATGA ACCCGCAATT
GGATTGAACG GTAAAAGACC AATTGAGTTA ATGGGCTCTG AGTCGGGCAC AGTAGATGTC
ATTCGTCTAA TTAATAGATT AATGCACGGA GTTTACATGT GA
 
Protein sequence
MAVQQLREFR LKPKVHQSIW AKVGLPAGEG PVLSDAINHG FSIDVVNRFA EAVSMPVTNL 
VQYAGLSRAT FARRVKDKEH RLKPSESEAF ARMIRMYEAA TLMLGGNKAD AIQWLNEPAI
GLNGKRPIEL MGSESGTVDV IRLINRLMHG VYM