Gene Shewana3_4182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4182 
Symbol 
ID4475888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp48256 
End bp48957 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content44% 
IMG OID639720540 
Producthypothetical protein 
Protein accessionYP_863698 
Protein GI117676122 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0852947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.252411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCA GCGGCGCAAC GATTTTGGAA TCATTGGTTA AGAATATTAA AGCCAACAAA 
TTCAGTTTTT TAGATTCGCT TAAAAACAAG CTAAAAAACA AATCGCTTGC GGATAACTCT
CGCAAACGGA GAGGTCTTGA TCCGGTAATT GTCTCCGTGG TGTCGGTATC TGTCCTTGCG
TATTTTATGT ATTCCGGCGG TGTCGATAGA TTTATCTTGT GGTACAAACT GGCGAGTAAT
GCAGACAACG CGTTGTTAAC TGATCCTGTC AATGTTTCTA TTCGCTCACT CGACACATTG
GCTGCAGCCA ATCCTGTGGC CAAGTCGAAT TTGACTGTGC AATTCGATGG GGTGACCACT
TACCTTGCCG ACGATACAAA ATTTAAAATC AGCCTCGTGT TTACTGATTA CCCTGACTGC
GCTGTCGTTA TTGACGGGTA TATGGCTGAG ACCACTGGCG GAATTAAAGA GGACAGCAAG
GCTCACGTAA GCTGCTTATT CTACGAAAGA GAGTCAATTT TTGGCACTAT TCCACTCACG
AGCATTACCA CTATACAGAA GCCAGGCCAA GACAATGAAG TGAACGCCGA ACAAAGTAAT
CAGCGTAAGT ATCTCGTAGA TGCAGAGCCC CTTCCCATGG CCAAAATGAT AGGTTGGAAC
CAACTGACAT CCTCCGAGAA AATCAAATTT GGCAGAGAGT AG
 
Protein sequence
MAFSGATILE SLVKNIKANK FSFLDSLKNK LKNKSLADNS RKRRGLDPVI VSVVSVSVLA 
YFMYSGGVDR FILWYKLASN ADNALLTDPV NVSIRSLDTL AAANPVAKSN LTVQFDGVTT
YLADDTKFKI SLVFTDYPDC AVVIDGYMAE TTGGIKEDSK AHVSCLFYER ESIFGTIPLT
SITTIQKPGQ DNEVNAEQSN QRKYLVDAEP LPMAKMIGWN QLTSSEKIKF GRE