Gene Shewana3_4181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4181 
Symbol 
ID4475887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp47179 
End bp47901 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content46% 
IMG OID639720539 
Producthypothetical protein 
Protein accessionYP_863697 
Protein GI117676121 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.120409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.252411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGA GTCAGTACAT ACAGTTAGCT ATAGCCAACA ATCGGCAAGT GACCGTTCCT 
GAGATAAACA TCGAAAAAAT GCATATTCAG TATGTTATCG ATGAATCGGG TTTTGACCTT
CCCAGAGACC AGTTAGAAGC CTACATGCTC AGTGTTTACG CTGCGACAGG CTTGTCATGG
AGCCCAGGTG AAAATCTGCT GTATTTGGCG CTGAATGACG AAGGTCAGAT TGAAACCAAA
CTGACCTATA TCGGCGGTCT GGATTTAGCG CTGCAATCGG GTGAAATTCA AGCATATCAG
GCATGGGCCA TTCGAGAAGG GGACTCTATT CGAGTTTTTA ACGACAGAAT GCCACTGGTC
AGCTTGGTTG GCTTATCACC TAAACGTGGC GAATTGCGTG GCGGTATTGC TTCAGCGCTA
TTGCCATCAG GCGAATACGT GTCCTTTGAG ATTGACCAAA TTGAACTGGA ATCTGTAGCT
GAGAACGGTT CAGAGGTTTG GCAATCAATC TACGTCGATG AAATGGTAAA GAAGCAAGCG
CTTTGGCGCC TATTAAACCA TGTCGCGATC ACTGCATTTG ACGGCTTTTA TAACACCCTT
ACGGCGCATT GTGAGGCGTT AAGGCCAATC CGCAAAATTG AAGCACCGAC CAAGAAAACA
AAGTTTATGG CTGCTGGCGT GGTAGAAACA TCAGCATGTC GTTTCGATGC ACTATTTGAC
TAA
 
Protein sequence
MKASQYIQLA IANNRQVTVP EINIEKMHIQ YVIDESGFDL PRDQLEAYML SVYAATGLSW 
SPGENLLYLA LNDEGQIETK LTYIGGLDLA LQSGEIQAYQ AWAIREGDSI RVFNDRMPLV
SLVGLSPKRG ELRGGIASAL LPSGEYVSFE IDQIELESVA ENGSEVWQSI YVDEMVKKQA
LWRLLNHVAI TAFDGFYNTL TAHCEALRPI RKIEAPTKKT KFMAAGVVET SACRFDALFD