| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4180 |
|---|
| Symbol | |
|---|
| ID | 4475886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008573 |
|---|
| Strand | - |
|---|
| Start bp | 46518 |
|---|
| End bp | 47165 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639720538 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_863696 |
|---|
| Protein GI | 117676120 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3723] Recombinational DNA repair protein (RecE pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.171725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.246945 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACCA GATACACCTC GGCAGATGCC GCACACTACG TTCAACATCT CTGTGTCGAA
TTTAATACTG CATACCCTAA TAACAATTTT CCGTACTCGG AGCTAAACAT TTTATTTGCT
CAGTTGCAGC GCCTGTTAAT GCTCAATCCA TCCCAAATTG GCTGGGTAAA TATTCATAGC
GTTTTTGATG TCATGACTGA GTTGACACAA GCACAAATCA GCCTCAATCC GAACCGCAAG
CAGGCATCTA TTCTGTTAGG GGCTTACTAC GATAGTGGTT GGTTAGGGGT GCAACTGTGC
TGGACATACC GTGGTTACCG TGACGCGGCG GCAAAGGCGG GGATCATCCG TTCTGCACGA
CCTGTGATTG TGTATGAAGC CGATGATTTT CAGTGGATTG ACTCTTTTAC TCCACCTCGC
CACCAATATG ACCCATTTAG CAAGAATCGT GGAAATATCC GTGGTGCCTA CTGCGTGGCA
GAGCTTGCAG GTGGCGGTGT GTGCGTAACA CATTTCACCT TTGATGATCT CATGACGACC
TTTGAACATC GTCAGGTGGC CACAAGAGCT TGGAATGAAT TTTTTGTAGG GATGATCTTA
GCTAAAACAG TGAGACTTTC CGAAAAAGCA TGGTCAGAAG CGGCTTAA
|
|---|
| Protein sequence | MSTRYTSADA AHYVQHLCVE FNTAYPNNNF PYSELNILFA QLQRLLMLNP SQIGWVNIHS
VFDVMTELTQ AQISLNPNRK QASILLGAYY DSGWLGVQLC WTYRGYRDAA AKAGIIRSAR
PVIVYEADDF QWIDSFTPPR HQYDPFSKNR GNIRGAYCVA ELAGGGVCVT HFTFDDLMTT
FEHRQVATRA WNEFFVGMIL AKTVRLSEKA WSEAA
|
|---|
| |