Gene Shewana3_4179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4179 
Symbol 
ID4475885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp45611 
End bp46507 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content49% 
IMG OID639720537 
Producthypothetical protein 
Protein accessionYP_863695 
Protein GI117676119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.156402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.249624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTAC AAGTAAAGCC GACAACCCGT TTAAAAACAC CCTTCACGAT TGCGTCTAAC 
GTGACATCGA CTTTCACCGT TGAGGCGTAT GTTGAACATG ATTCGATAAC CATTGCCACT
AATTCGGTGA ATCAAGGCGT GAAAGCGCTG GAAGTGATCT CGCGTGACGA CAACTCCGTG
TGGGAGGTCA TTCAAAATCG ATTCGCGGTG TGGACTCAGC ATTATATCCA GTTAGGGGCT
TACTTCTTAC AAGAAGGGAC GTTGCCGCTG CCAGCGACCA AAGCGAGTGA GCAATTAGAG
ATCCTGAAGT CAGTGCCGGA AATCTGTGCC GGTGATTGGA TTGTAGAGAG CGGAACTAGC
CAGATTTTTA CGCTGGTTAA AGAGCAGGGC AAGGTGAGTG TATTAACCAC GCATCACTGT
GAGAGCTTCC ATGTTTGCAC AAAATTGATT GCGTGGTTTG TGGGCCAAGA GCAATTCACG
TCTGCGATGT TTGAGGAATC AAATAGTGGT TATCTCATTT TGGACGTGGC AGAGGACGGG
GAGCCGTTAA TGCCCGAGTT AACCCCAAGT CTGAATGCAC GTAAAGCAGC TGCAGGGCGT
TCACTCGCTG CACTACGTCA TTTGCCCTCG GTTGATATTC GGGTGCCGGT GATGGCTCCT
TTGCCAAATA TCGAAGTGCT GGCCAAGATG CCGACAGCCT ATGAAGTGCT GAGCAAAGTT
AGCGCCTTAC AGCGCAGAGT CGTGGCGATT GGGACTGTGG TGAAATCGAA CCAGACAAAA
GAGATTATGG GGAACACATT ACAGGGGTTG GCGGGTTTAA GAGCCTCTGG TTTGTACGAT
GTGGAGCTTA TTCTAAAAGG TAAAAAATTG CTTCGTTGGA AGTATCTGTC AGAGTGA
 
Protein sequence
MELQVKPTTR LKTPFTIASN VTSTFTVEAY VEHDSITIAT NSVNQGVKAL EVISRDDNSV 
WEVIQNRFAV WTQHYIQLGA YFLQEGTLPL PATKASEQLE ILKSVPEICA GDWIVESGTS
QIFTLVKEQG KVSVLTTHHC ESFHVCTKLI AWFVGQEQFT SAMFEESNSG YLILDVAEDG
EPLMPELTPS LNARKAAAGR SLAALRHLPS VDIRVPVMAP LPNIEVLAKM PTAYEVLSKV
SALQRRVVAI GTVVKSNQTK EIMGNTLQGL AGLRASGLYD VELILKGKKL LRWKYLSE