Gene Shewana3_4178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4178 
Symbol 
ID4475884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp44721 
End bp45335 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content48% 
IMG OID639720536 
Producthypothetical protein 
Protein accessionYP_863694 
Protein GI117676118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00705375 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0874836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTGA GCTTGAGCCG GACCCATTTG TTGTTCAATC ATTGTTTAAC CAATAAGGCG 
CCTAGTATGA CCAGGCTGAG TTCACTCGCA TTACTTATGC TTTCCTTGTC CATTACTAAC
GGTTTGGCTG CGGCCGACCT GAAGTATCAC CGTGAAGATT ACCCGCATTG GAGCGATCTG
GATGGCAATG GTCTCAATAC GCGCCACGAC TTACTCGCAA CCCAATCCAC GGTTAAACCA
AGTTTTAGCC GTGATGGTAA AATCGTGACT CGTGGAAGAT GGGTGTCACC TTGGACGGGG
CAAATCTATC TCGATGCCTT TGCGCTCGAT GTGGATCACA CTGTACCGCT TGGCTATGCC
CATGCCCGAG GCGCTAAATA TTGGGATCGC TATCAGCGTG AAATGTTCGC AAACGATGTG
AGAAATTTGC AGGTAGTCGA AAAGGGTTTG AATAAAGAAA AAGGGGCGGC GGGGATCACA
GAGTGGTTAC CGCCCACCAA TCAGTGTCAG TATATCTTGC GATTTCACCG GATCATGAAA
ACGTATCATC TAAAATATTT CACTAAAGAA GAACCACGGG CGCTGGCGCT GGTAGCTCAG
TGTCAAAGGG GGTAA
 
Protein sequence
MILSLSRTHL LFNHCLTNKA PSMTRLSSLA LLMLSLSITN GLAAADLKYH REDYPHWSDL 
DGNGLNTRHD LLATQSTVKP SFSRDGKIVT RGRWVSPWTG QIYLDAFALD VDHTVPLGYA
HARGAKYWDR YQREMFANDV RNLQVVEKGL NKEKGAAGIT EWLPPTNQCQ YILRFHRIMK
TYHLKYFTKE EPRALALVAQ CQRG