Gene Shewana3_4169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4169 
Symbol 
ID4475910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp34151 
End bp35299 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content48% 
IMG OID639720527 
Producthypothetical protein 
Protein accessionYP_863685 
Protein GI117676109 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0380533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCTA ATGCCTTTCT AACGATAGGA AAAGCCGCAG ACGGAGAATT AATTAGTATC 
GATGCGGTGA AGAGTGGTAA AACTGACCTC TCCTGCCCCT TTTGTGCCGT GCCGTTGATC
GCAGCAAAGG GGCTAGTCAA TATTCATCAC TTTCGTCATG ATGGCGAAAC TTGCCATGAG
TCACTGCAAC AGCTGCCACA AATACCAGGC TGGGATCACT TTCACCTCTG CGTGCCGGAT
TTCCTTGTTA ATGTCTTACA GAATTACGCC GAAGCCCATC CTGGGGAAGT ATTTTGGTAT
GAACCTAAGC ATGTTCGTGA TCTGTTAAAG CACAATCTTA TTGAGACCGA CAGTTACACG
GGTAAATATC GACTGACCGA TGCCGCGTTA ATCATCACCG GCCAACTATC GCTGAGTAAA
TTCAGCAACT GGTTTCGCCG CCAACTCACA GCCCGGATAC ATAGAAAATC GCAGTTAGTG
GCTAACAACG AACTACATCG AGCACACTTT GAGATTGAGG CTTGGCGCCA ACAACAGCTG
ATGGTAGCCA CCACCTACTT ATTTGAGTTA ACCCTAGACA ATGGTGAAGT GATTTATAAG
GTGGGCCGGA CTCGTCGTGA GGTAGACGTG AGACTAGCTG AAGTTGAATC CGAGATGAAA
GCCCACTTTA ACCAGGGCAT CTGCGCCAAA GTATTGCGGT TAATCCCTAA CGGCGGTTAT
CTGGAGCAGT ATGTATTGTA TCGATACCGG CTATCAAAGA GAGAGATAGG AAAACATCAA
GAATATCTGA GCCTCGATGC GTCAGCATTG AAACAGCTTA AGGCGGCATT CACCCGCGCA
GCCAATGACT TAGCCCCCTT CGATAAGGAC GAGCGCTTTA TTGCATCTGG GCGTTGGCGT
TACGAACCCA AGCGATTAGA CGCGGTACGC AAAGGGATTA AGCAGACTGT AGAAAGTGGT
AGCAGTTTCG GGCGCCCCAA GGGAACAACC AAGGTCGGCA GCGAGGAATG GCGCAAGCAG
TATCAATATG TGATTGATCT GTTAGAGGCA GGCAATCTCT CTCAAGAGAA AATCGCCAGA
ATGACATTTA ATAGCACCTC GACGGTGAAG CGAGTTAAAC AAGTTATATC CAAGGAAACG
CCAGAATAA
 
Protein sequence
MPSNAFLTIG KAADGELISI DAVKSGKTDL SCPFCAVPLI AAKGLVNIHH FRHDGETCHE 
SLQQLPQIPG WDHFHLCVPD FLVNVLQNYA EAHPGEVFWY EPKHVRDLLK HNLIETDSYT
GKYRLTDAAL IITGQLSLSK FSNWFRRQLT ARIHRKSQLV ANNELHRAHF EIEAWRQQQL
MVATTYLFEL TLDNGEVIYK VGRTRREVDV RLAEVESEMK AHFNQGICAK VLRLIPNGGY
LEQYVLYRYR LSKREIGKHQ EYLSLDASAL KQLKAAFTRA ANDLAPFDKD ERFIASGRWR
YEPKRLDAVR KGIKQTVESG SSFGRPKGTT KVGSEEWRKQ YQYVIDLLEA GNLSQEKIAR
MTFNSTSTVK RVKQVISKET PE