Gene Shewana3_4161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4161 
Symbol 
ID4475902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp22342 
End bp23283 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content44% 
IMG OID639720519 
Producthypothetical protein 
Protein accessionYP_863677 
Protein GI117676101 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.162977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TGAAACAACA GTTCTTAGAG GTTTCCGATG CATTAGCGCT CGGAAACCCC 
GCCATTATTG AAAAAGATTA TTGGGTGGTT GCTCTACTTT CTGAGCTTGA ACAGTTAACG
TTTGAAACTC ATCAAATGGT GTTTTCCGGC GGCACCGCAC TGGCTAAGTC CAATGTTAAA
ATACTTAGAA TGTCTGAAGA CGTGGACATA AAGCTGATCC CCACGCCGCA ATTTCAACAC
CTTAGTCGCG GCAGGAAGAA ACAGTACCGA AAAGCGTTAG CAGTAAAAAT TGAAACAGCG
ATTATTGCAT CGAACACATT TTCTATCGAA GCTAGATTAG TTCAGGATGA ATATCGCTAT
GTGGAATATG AGCTTAAATA TCCGCAACAA TTTAGCCAGG CTCCTTGTCT ACGCCCAATC
ATCAAGTTAG AACTGATGGA AACCATTCCA CTGCTTGCGC TGGAAACGCG GGGCATCCAA
TCGTTAGTCG CAGAGCTTTA TAAGCTGCCA CAAGAAGTGA ACGGATTCAT CTGCGTATCA
GTAAATACCA CCTTGGTAGA GAAAGTGCTT TCCATGTTAC GCCGCACAAT GTCTGTTAAG
CGTGATGCAG CCCGAAGCGA TGACGTCACT TTAGTTAGGC ATATTTACGA CGTACACTGT
ATTCATGCAG CACAGGCCCT TGATAATGAA TTACTTGCGC CCCTTTTTCG CGCCATATTA
GCAGAAGATA TTGCTCGCTT TGGCAACCAA CATGCCGAAT TCGTCATGGA CCCAGCCAAT
GAGTTACGCC TTGGCTTACA GGAGATAGAA AGCAACCCAC TCTTCAGGCA ACGCTTTAAT
GATTTTGTTA AACCCATGGT GTTTAACTCG CAACCCCCCA ATTTTGATAC GTGCTTTATG
TCCTTTAAAC ATATTGCGAC CTCACTCATT CTGACTATTT AG
 
Protein sequence
MKKLKQQFLE VSDALALGNP AIIEKDYWVV ALLSELEQLT FETHQMVFSG GTALAKSNVK 
ILRMSEDVDI KLIPTPQFQH LSRGRKKQYR KALAVKIETA IIASNTFSIE ARLVQDEYRY
VEYELKYPQQ FSQAPCLRPI IKLELMETIP LLALETRGIQ SLVAELYKLP QEVNGFICVS
VNTTLVEKVL SMLRRTMSVK RDAARSDDVT LVRHIYDVHC IHAAQALDNE LLAPLFRAIL
AEDIARFGNQ HAEFVMDPAN ELRLGLQEIE SNPLFRQRFN DFVKPMVFNS QPPNFDTCFM
SFKHIATSLI LTI