Gene Shewana3_4160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4160 
Symbol 
ID4475901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp21935 
End bp22345 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content43% 
IMG OID639720518 
ProductS-adenosylhomocysteine hydrolase 
Protein accessionYP_863676 
Protein GI117676100 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.142981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTG TTGACAGTAT CTTTCAAAAG ATAAAGCGTT CTAGACGCTA CGTTTTCGAA 
CGCAAAGACT TTGACGGCAT TGCTAGCTAT GACCAAATTG GCCGATCGCT TAATCAGTTA
ATGGATAGAG GCGAGATAAT GAAGCTTGGC TATGGCTTAT ACACGAAAGC GCGAGTAAAC
AGCCTGACAG GACGTTTAAT GCCGTCGTGT CCAGGTGGTA GCGATGCACT TATGCGTGAA
ATATTAAAAA TGAAAGACAT CGATTTCGAG ATAGATAATC TGTCCTTACA AAGTCTTTCC
GGTAAAAACA CCCAAATCCC CTCATCCGTT CATTACTCAT GGGATCAAAA ACAGTTCAAT
CGCAAATTGG TTGTTGGTAA CAGACTATTA ACGCCAGCAA GTAGACCATG A
 
Protein sequence
MAAVDSIFQK IKRSRRYVFE RKDFDGIASY DQIGRSLNQL MDRGEIMKLG YGLYTKARVN 
SLTGRLMPSC PGGSDALMRE ILKMKDIDFE IDNLSLQSLS GKNTQIPSSV HYSWDQKQFN
RKLVVGNRLL TPASRP