Gene Shewana3_4157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4157 
Symbol 
ID4475933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp19416 
End bp20315 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content53% 
IMG OID639720515 
ProductCo/Zn/Cd efflux system component 
Protein accessionYP_863673 
Protein GI117676097 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.162332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCA CATGCGGTGG CAATTGCCAA AATAACGCGA CGGAGAACAC TCCCCAAATT 
GCCGAAGTAC ACGACGCTTC TCATGGCGGC TTTGTTAGTG AGTATCATGT CCCCAAGATG
GACTGTCCTT CAGAGGAAGG CATGATCCGT ATGGCGTTGG ACAGTGTGCA TCCTAAAGTC
ACATTGGAAT TCGATACCCC CAAGCGCAAG GTGAGTGTCT ACCATGGTGA TAACGCTGAC
CTTATTAAAA AAAGAATGCA ATCAGTCGGT CTGGGCGCGA GACTTGTCAG TACAATGCCC
GTCGCCAGCG AGTCCATCGC CCGTGCGCAG GCGTCTGCAA AACAGGAGGC AGAAAGAGAA
GCTGGCATTC TCAAGTGGCT ACTGGCAATC AATGGCATCA TGTTTGTCAT TGAAATTACT
GTCGGCTGGT GGGCGCAATC CACTGGTTTG ATTGCGGACT CCCTGGATAT GTTCGCTGAT
GCCGCCGTCT ACGGCGTGGC GCTGTATGCC GTAGGGCACA GTGTGCGGAT GAAGTTGCGT
GCAGCCCATT TTTCCGGTTG GCTTCAGATC ATTCTCGCCT TGGGCGCTTT GGGCGAGGTG
GTAAGGCGAT TAGTATTGGG TAGTGAACCG GTTTCCACTT TGATGATGAG CTTCGGGCTT
GTTGCCTTGG CGGCCAATGT GACCTGTCTG CTGTTGATTG CCAAAAGCCG GGATAGCGGC
GCCCATATGA AAGCCAGCTG GATTTTCTCC GCCAATGACG TGATTGCCAA TCTAGGGGTG
ATCCTTGCCG GTGGATTGGT GGCCTGGACG GGCTCACGTT ATCCAGACTT GGTGATTGGC
CTTATCATCG GTTTGATTGT GTTGAATGGT GCGCGCCGTA TCTTGCAGCT CAAGTCCTGA
 
Protein sequence
MTTTCGGNCQ NNATENTPQI AEVHDASHGG FVSEYHVPKM DCPSEEGMIR MALDSVHPKV 
TLEFDTPKRK VSVYHGDNAD LIKKRMQSVG LGARLVSTMP VASESIARAQ ASAKQEAERE
AGILKWLLAI NGIMFVIEIT VGWWAQSTGL IADSLDMFAD AAVYGVALYA VGHSVRMKLR
AAHFSGWLQI ILALGALGEV VRRLVLGSEP VSTLMMSFGL VALAANVTCL LLIAKSRDSG
AHMKASWIFS ANDVIANLGV ILAGGLVAWT GSRYPDLVIG LIIGLIVLNG ARRILQLKS