| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4155 |
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| Symbol | |
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| ID | 4475931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008573 |
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| Strand | - |
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| Start bp | 16506 |
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| End bp | 17447 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639720513 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_863671 |
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| Protein GI | 117676095 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.259995 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAA ATACCCAGTT AAAAAAATCA TTTATCCGTC TAATTACGTG TTGCTTTGCG
ATCACCCTGT TGTCTGGACA AACTTTCGCC GAGACGGGTC ACGGAGAAGA GGAAGAGCAC
GGTGAAGAAG GCCACGTCGA GCTGACCCAG GAGCAGATAA AACATGCCGG CATTACGCTG
GCAACCGTTA CCTCGGGCAG CATCCGCGAT GTTTTGCCAG TATATGGCGT CGTCGCCACC
AACGCAGAGC GTGTACAGTC GGTAACGGCA CGCTTCGACG GCGTTATTCG GGAAGTTAAA
AAAAGTGTTG GTGATCCGGT TCGCAAAGGC GAACCCCTGG TGACTGTGGA AGCGAATGAA
AGTCTGAAAA CCTATTCGAT AGTATCCGCA CTCAATGGTG CCGTTACCCA GCGGAATGCA
AACGCTGGCG AGCACACTAC GGATATCCCG TTGTTGGTAG TACAGGATTT CTCAACGGTT
TGGGTGGAGC TGTCGGTTTT TCCCAAGGAT GTTGCTCAGG TTGAATTAGG CCAGCGGGTT
CGCATTCTCA GTCTCGATTC GACCCATATC GCAGAGGGAA AAATCATCTA TATTGCGCCG
CTTGGCCAAA CTGGTAATCA GGCCATTATG GCGCGCGCTT TGATCGACAA CCCGAATGGC
ATTTGGAAAC CCGGTCTCTT TGTCAACGCG CAAATCACCC GCGCCGAAAT AGCCGCTCCA
ATGGTGATCC GCAACGAAGC CTTGCAAATC GTCGAGGATA ACCCTGTCGT TTTTGTTCGG
GGTGAGGAAG GTTTTGAAGC ACGTACAGTG ACTTTGGGGC GAACCGACGG TGAGCTAACC
GAAGTGGTGG CAGGTCTGTC CGCAGATGAA GTGTATGTCA GCAAAAACAG TTTTATTTTG
AAAGCGGAAT TGGGTAAAGG GGAGGTTGGC GATGATGATT AA
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| Protein sequence | MKSNTQLKKS FIRLITCCFA ITLLSGQTFA ETGHGEEEEH GEEGHVELTQ EQIKHAGITL
ATVTSGSIRD VLPVYGVVAT NAERVQSVTA RFDGVIREVK KSVGDPVRKG EPLVTVEANE
SLKTYSIVSA LNGAVTQRNA NAGEHTTDIP LLVVQDFSTV WVELSVFPKD VAQVELGQRV
RILSLDSTHI AEGKIIYIAP LGQTGNQAIM ARALIDNPNG IWKPGLFVNA QITRAEIAAP
MVIRNEALQI VEDNPVVFVR GEEGFEARTV TLGRTDGELT EVVAGLSADE VYVSKNSFIL
KAELGKGEVG DDD
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