Gene Shewana3_4153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4153 
Symbol 
ID4475929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp12893 
End bp13294 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content50% 
IMG OID639720511 
Productnitrogen regulatory protein P-II 
Protein accessionYP_863669 
Protein GI117676093 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.312763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACCCT CAGGATCGCG GCAAGCATCC TCTTGCCGCG ATCCATCTAA CAGTAATAGC 
GAATTTTTTT GGAGTATTTA CATGAAACAA ATTACCGCCT TTATCCACCA CGTTCGATCC
GCTGATGTCA TCGACGCACT GCGTGACGCG GGTTACAAAA ACCTATCGCT ACTCGACATC
AAGGGTACTT TGAAGCCCCT CGGGGAGCGG GAATTGGCCT ATTCTGCCGA AGCTGGCGTG
GTTATCTCAG AAGTCCAATT ATCACTGGTC TGTGATGACA ATCAGGTGGA TGAGGTGACG
ACCATCATTC GCAAAACCGG GAAAATCGGA CCCAACATAT CCGGTTGGGT ATACGTCACC
CCTGTCGAGC AAGCGCTACC GATTGGAGGA AAAGAAAATT AA
 
Protein sequence
MTPSGSRQAS SCRDPSNSNS EFFWSIYMKQ ITAFIHHVRS ADVIDALRDA GYKNLSLLDI 
KGTLKPLGER ELAYSAEAGV VISEVQLSLV CDDNQVDEVT TIIRKTGKIG PNISGWVYVT
PVEQALPIGG KEN