Gene Shewana3_4144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4144 
Symbol 
ID4475920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp2880 
End bp3239 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content43% 
IMG OID639720502 
Productplastocyanin domain-containing protein 
Protein accessionYP_863660 
Protein GI117676084 
COG category[S] Function unknown 
COG ID[COG4633] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.9179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.258983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATTGG TCAATATAGC TGGCATTGTC CTGATTACAC TTATTGTTTG GTGGTTTTGG 
CTTTACAAAC CAAGAGAGGC TGATGTAAAG GAAAAAGAGC TAGTGATCAT TGTTGAAAAC
GGCACTTATT CACCTTCGCG AATCAAAGTG CCCGCCGGCA CACCGGTAGA ACTTAAATTT
CTGCGCAAGG ACCAATCTCC CTGTTCGGAA ATCCTACAGA TCCCTGAACT GGAAATCAGT
GACACCTTAC CGCTTAATAA GCAGAAATCC ATTCAACTTC CGGAAATGCA GCCTGGTGAG
TACGCTTTTC ATTGTCAGAT GCAAATGTAT CGAGGTCTGA TCTCTGTAGG TAAAAAATAG
 
Protein sequence
MLLVNIAGIV LITLIVWWFW LYKPREADVK EKELVIIVEN GTYSPSRIKV PAGTPVELKF 
LRKDQSPCSE ILQIPELEIS DTLPLNKQKS IQLPEMQPGE YAFHCQMQMY RGLISVGKK