| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_4085 |
|---|
| Symbol | |
|---|
| ID | 4457574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 4969049 |
|---|
| End bp | 4971289 |
|---|
| Gene Length | 2241 bp |
|---|
| Protein Length | 746 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639704855 |
|---|
| Product | adenylate/guanylate cyclase |
|---|
| Protein accession | YP_848185 |
|---|
| Protein GI | 116751498 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.104935 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATCGGCA GCCGCAAGCT CAGCTCCGTT TTTTCGTGGG AAGTGATCTT CGTGGCGATC
ACCACCCTGA TCATGGCCGT CTTCTACATC CTTGAAGTCC ATTTCATCGG CCTGGTCGAG
CTGAAGGCCT GGGACCTTCA TTTCAGGGAG CGCGGCCCGG TCACCCCATC CGGCATGACG
GCTTTCGTTA CCATCGATGA GGAGAGCGTT AACCGGGAAG GGCGCTGGCC GTGGCCCAGG
CGCCGCATGG CACGGCTGAT CGAGGCGGTG GACCGGCACG GCGCAAGGGT CATCGGCCTG
GACATGGGGT TCTTCGAACC GGATCTCAAG CTCCGGCAGC AGGCGGTACT GGACGTGCGG
GATCGCCTCA GGGGCAATCC CGCCGGTTCT CCCGACATCC TGGCGCTGCT CGAGGATGCC
GCACGGGAGG AAGATGACGA CGCCATCCTT GCGGGCACCA TAAAACGGTT GTCGGCTCCT
TTGGTTCTCG GGCATTTCTT CTACGATTCC GCCAGCAGGT ACCTCCCCCC GCCTCCGCCC
GAAGACGTTT TCGAGCGGGA CGTGTGTCCG ATCGTTCACG TCAGGGAAGA ACCGGAGAAA
GACCGGTTGT TCGAAGCGGC GGGTCTCGAG ACGAACATTT CCGTGGTGCG GGATGCAACC
CGGCATTCGG GGAGCTTCAA CGTCAAGACT GACCCGGACG GGGCCGTGCG CTGGATGCCC
CTGGTGTTCC GGTACGAGGG GCGTATCTTC CCCTCGCTTG CGTTGCGGAT GTTGACGGTT
TCCCTGCCGG AGCTTCCCCT GATCGTCAAG CTCGATGCCG CGGGCGTCGA GGACATCCGT
CTCGGTCCGG TTTCGATTCC CACCAACAAC CAGGGAGAAT TGCTGCTCAA CTTCTATGGG
CCGGGGTACA CCTTTCCCCA CTATTCCGCC TCCGCGTTGC TGCACGGCGA GGTTCCCGCG
GATTGCCTGG CGAATCGGCT GGTCGTGATC GGAAACACCA CCATGGGCCT CTATGACATG
CGACCGACGG CCTTCGACCA GGTTTTTCCG GGGGTGGAGC TGCACTGCAC GGTTTTGGAG
AATGTGCTTC AGGAGAATTT CCTGAGGCGG TCGAAGCGGT CCGTCCTGCT CTGGGACCTC
GGCGCGCTGG CGGGGCTGGC GGTGATTTTC CTCGTTTTGC AGTCCTGCCT GCACGGCGTC
CTGATCGTCG TTTCGGTGGC GGCGCTGCTC GCAAGCTACG TCTTCCTCAC CCATTATGCC
TTTCTGGGGC CCGGGGTCTG GCTCAACCAC TTGTACCCGC CGATGAACCT GGCGATCGCA
TACCTCGGCA CCTCCGTGCA TCGGTACCTC GAGGAGGAGC GGGAGAAAAA CAAGATCAGA
AAAACCTTCA GCCTCTACGT CCACGGGTCC GTGATGGACG AGATGCTGGC TCATCCGGAA
CGGCTGAAGC TGGGCGGAGA AAAGCGGGAG CTTTCGGTCT TGTTTTCCGA CATCCGGGGG
TTCACCACCC TGTCGGAACA ATACAGCCCC GAGAAGCTGG TTCCTCAATT GAACGACTAC
CTGACCCGGA TGACCCAGGT GGTCTTCGAT CATCACGGCA CCCTGGACAA GTACATCGGA
GATGCGATCA TGGCCATCTT CGGGGCGCCG TGGCCCCAGG AGGACCATCC GGACCGGGCC
TGTGGAACGG CCATCGACAT GGTCAATACC TTGCGGAGCC TGAAGCGGAC CTGGGAGGAA
GAGGGGCTGC CCGTTCTCGA CATCGGGATC GGCATCAACA CCGGCACGAT GATGGTCGGC
AACATGGGAT CGGACCGGCG TTTCGACTAC ACGGTGATCG GGGACAACGT GAATCTCGCA
TCCAGGCTGG AGAGTCTCAC CAAGGTTTAC GGCGTGGCCA TCGTGGTGAG CGAGAGCACC
TGGAACCTGG TCCGTGGGAA CTTTATCGGG CGCGAACTGG ACGTCGTCCG GGTGAAGGGC
AGGCTCCACG CTGTGGCGAT CTATGAAATC ATGGGGAGGA AGGGCGATGG GATACCCGCG
GAAGCCCTCG ATGTCTATCA CGAAGGCCTT CATTTGTACC GGCGGGGCGA ATGGGCAAAA
GCCCTGGAAC TGTTCATCAG GATGGAAGAG TGGCTGCCCG CCGATCGCCC TTCAACGCTC
TACCAGGCAA GGTGCCGCGG TCTATTGAAC CGGCCGCCGG AGGGCGAATG GTCCCACGTG
ACCGTTCTTG ACCGGAAATG A
|
|---|
| Protein sequence | MIGSRKLSSV FSWEVIFVAI TTLIMAVFYI LEVHFIGLVE LKAWDLHFRE RGPVTPSGMT
AFVTIDEESV NREGRWPWPR RRMARLIEAV DRHGARVIGL DMGFFEPDLK LRQQAVLDVR
DRLRGNPAGS PDILALLEDA AREEDDDAIL AGTIKRLSAP LVLGHFFYDS ASRYLPPPPP
EDVFERDVCP IVHVREEPEK DRLFEAAGLE TNISVVRDAT RHSGSFNVKT DPDGAVRWMP
LVFRYEGRIF PSLALRMLTV SLPELPLIVK LDAAGVEDIR LGPVSIPTNN QGELLLNFYG
PGYTFPHYSA SALLHGEVPA DCLANRLVVI GNTTMGLYDM RPTAFDQVFP GVELHCTVLE
NVLQENFLRR SKRSVLLWDL GALAGLAVIF LVLQSCLHGV LIVVSVAALL ASYVFLTHYA
FLGPGVWLNH LYPPMNLAIA YLGTSVHRYL EEEREKNKIR KTFSLYVHGS VMDEMLAHPE
RLKLGGEKRE LSVLFSDIRG FTTLSEQYSP EKLVPQLNDY LTRMTQVVFD HHGTLDKYIG
DAIMAIFGAP WPQEDHPDRA CGTAIDMVNT LRSLKRTWEE EGLPVLDIGI GINTGTMMVG
NMGSDRRFDY TVIGDNVNLA SRLESLTKVY GVAIVVSEST WNLVRGNFIG RELDVVRVKG
RLHAVAIYEI MGRKGDGIPA EALDVYHEGL HLYRRGEWAK ALELFIRMEE WLPADRPSTL
YQARCRGLLN RPPEGEWSHV TVLDRK
|
|---|
| |