| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_4075 |
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| Symbol | |
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| ID | 4457564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4955822 |
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| End bp | 4957702 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639704845 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_848175 |
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| Protein GI | 116751488 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0786744 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGAAC TCCTGATGCC CGGAAGCGAG AAGAAGCATC TCCTTCTGGG CAATGAAGCC
ATTGTCCGCG GGGCTCTCGA AGGGAACGTC CGCTTTGTTG CGGCCTATCC CGGGACTCCA
TCGTCCGAGA TCATCGACCG TTTCCACCGG ATCGGTTCCG ATGCCGGCGT TTACGTGGAG
TACTCGGTCA ATGAAAAGGT TTCGGTGGAA ATGGCGGGGG CGGCGGCCGT TTCAGGGGTC
CGCAGCCTGT GCGCCATGAA GCACGTGGGG TTGAACGTGG CTGCGGACGC TTTCATGACC
CTGGCCTACG TGGGCGTGAA GGCAGGCATG GTGGTGGTCG TCGCGGACGA TCCTTCCCTG
CATTCCAGCC AGAATGAACA GGACAATCGC TATTACGCGA AGCTGGGCAA TGTCCCGATG
TTCGAGCCGT CCACGCCCGA GGAGGCGAAG GCGATGACCC TCGAGGCCCT GGCGGTCTCG
GAGAAGTATC ACATTCCGGT CATGCTCCGC ACCACCACGA GGGTCAATCA CTGCAGAGGG
CCGGTAACCC TGGGAGAGAT CCCTTCGGGA ACGCCGCGCG GCGAATTCAA GAAGGATCCC
TTCAACCTGG TGGTCGTCCC GATGGTGGGC CGCAAGCTTC GGCTGGCGCT GCTCGACAAG
CTCGCCCTGC TGCAGGAGGA GGCCGAGCGA AGCGCGCTCA ATTTCAGCAC CGGCAAAGGG
AAATGGGGGA TCGTCACCAG CGGCGTCTCG TACCTCTACG TGCTGGACGC CGTGCGCGAC
CTGGGGCTCC GGGATCGCGT CAAGGTGCTC AAGCTGGGTT TCACGTTCCC GCATCCGAAA
GCCCTGATCC GGGACTTCAT GCGTGGACTG GGAAAAGTCC TCGTGGTCGA GGAACTCGAA
CCGTTCCTGG AGGAAGCGGT ACGGGTGACC GCGCAGGAGT TCGGTCTGCG CGTCGCTATT
GCGGGCAAGG GCGCCGAACT GACGCCGCGC GCCTTCGAGC TGGACGGCGT GAAGGTCAAG
CGGGCCATGA GCAGCTTTTT CGGCCTGAAT TACCAACCTC CGCGGGTCTT CACCGCGCCG
GCGCTGCCGC AAAGACCTCC CAACCTCTGC CCCGGCTGTC CCCATCGCGC CACCTATGTT
TCCGTGCGCA AAGTGTTCGG AGACGATGCC ATCTACCCCA CCGACATCGG CTGCTACACC
CTGGGCATTC TGCCGCCTCT GCGCATGGCC GATTTTCTCA TCTGCATGGG CTCCGGGGTG
TCCACGGCCG GAGGGTTCAG CAAGGTGCAG GACAAACCGG TGGTGGCTTT CATCGGGGAT
TCCACCTTCT TTCATTCCGG GATCACCGGG CTCATCAACG GAGTTTCCCA CGATCACCGG
TTTCTCCTGG TCGTGCTCGA CAACGGGACA ACCGCCATGA CCGGGCATCA GCCTCATCCC
GGGATCGAAC TGACGCCCGC GGGGAAGATC GAGCCCCGGG TCAGCCTCGA GAATGTCATT
CGAGGCTGTG GAGTCAAGCG CCTGGAAGTG GTGAATCCGC TCCGGATGGA AAAGACCCGG
GAAGTGCTCG AGGATATGCG CCGGACGCTG AAGGAACCCG GCGTATCGGT GCTGATTTCC
AAGAGTCCCT GTCCGCTGTT CGAGAACCGG ATGCTGCGCA AGAGGCAAAA GGTAGTGTTC
CAGGTGGATG CGTCCTGCGA TCTGTGCAAG CGGTGTCTCG AGGAGCTGGG ATGCCCCGCT
TTCGCATGGG AACCCGGTGC GTCCGGGGAA ATGTGCGTCC GCATCAACGA GGCCCTTTGC
AGCGGGTGCA GCGTCTGCTC GCAACTGTGC AAATCCATCA AGCCCAAGCG CATCGAAGAG
TCGAGGGGAG GGAGCGAATA A
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| Protein sequence | MHELLMPGSE KKHLLLGNEA IVRGALEGNV RFVAAYPGTP SSEIIDRFHR IGSDAGVYVE
YSVNEKVSVE MAGAAAVSGV RSLCAMKHVG LNVAADAFMT LAYVGVKAGM VVVVADDPSL
HSSQNEQDNR YYAKLGNVPM FEPSTPEEAK AMTLEALAVS EKYHIPVMLR TTTRVNHCRG
PVTLGEIPSG TPRGEFKKDP FNLVVVPMVG RKLRLALLDK LALLQEEAER SALNFSTGKG
KWGIVTSGVS YLYVLDAVRD LGLRDRVKVL KLGFTFPHPK ALIRDFMRGL GKVLVVEELE
PFLEEAVRVT AQEFGLRVAI AGKGAELTPR AFELDGVKVK RAMSSFFGLN YQPPRVFTAP
ALPQRPPNLC PGCPHRATYV SVRKVFGDDA IYPTDIGCYT LGILPPLRMA DFLICMGSGV
STAGGFSKVQ DKPVVAFIGD STFFHSGITG LINGVSHDHR FLLVVLDNGT TAMTGHQPHP
GIELTPAGKI EPRVSLENVI RGCGVKRLEV VNPLRMEKTR EVLEDMRRTL KEPGVSVLIS
KSPCPLFENR MLRKRQKVVF QVDASCDLCK RCLEELGCPA FAWEPGASGE MCVRINEALC
SGCSVCSQLC KSIKPKRIEE SRGGSE
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