Gene Sfum_4048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4048 
Symbol 
ID4457607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4914335 
End bp4915582 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content62% 
IMG OID639704819 
ProductOsmC family protein 
Protein accessionYP_848149 
Protein GI116751462 
COG category[E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
[COG1765] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000134708 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTTC AAAAGCTCGT TTTCAGAAAC GCGGACGGCA AGAACCTTTC GGCGCGGCTC 
GATTTGCCCG CCGATGAGAA ACCTTTGACT TATGCCATAT TTGCACATTG TTTTACATGC
ACAAAGAACT TCAACGCCGT GGTCAACGTC AATCGCGCCT TGTCGAGCCG GGGGATTGCC
GTGCTCCGGT TCGACTTCAC CGGTCTGGGC GAGAGTGAAG GAGATTTCTC CGAGACGAAT
TTCTCCACCA ATGTATCCGA CCTGGTTGCG GCGGCCCGGT TCCTGGAATC GCACTTCGAA
GCGCCACGGT TGCTGCTCGG CCATTCCCTG GGCGGGGCGG CGGTGCTTCA GGCGGCGGCA
CTCATCCCGT CGGCTATGGC GGTGGCGACG ATTGCCGCCC CGTCCGACTT GGCCCACGTG
GCGGAGCTTC TGGGCGGTTC CAGGGCGGAA ATCAAGGCCC GGGGGGAGGC GGAGGTGAGA
CTTGCGGGCC GTGACTTCGT CATCCGAAGG CAGTTCCTCG AGGACCTGGA GGAAAAGCGC
ATGGAGCAGA CCATCCGCGA CCTGCGCAAG CCGTTGCTCA TCATGCATTC CCCCCTGGAC
AGCATCGTTT CCGTGGACAA CGCGGCCAGA ATTTTCCAGG CTGCCGGACA CCCGAAAAGC
TTCGTTTCTC TGGATACCGC CGACCATCTT CTGTCCAACC GTGCGGATTC CCTTTATGCC
GGCTCGGTGC TGGCGGCGTG GGCGTCCAGG TACCTGGAGA TGCCCGAAAC GACCGCCGCC
CTGAGGGACC TCACCGACAA CCGCGTGGTG GCACGCACCG GGAGGACGGG ATACCGAACC
GAGATCCTGG CCAACGGGCA CCGGTTGATC GCGGACGAAC CGATTGCCGT CGGGGGCGCC
GACACCGGTC CCACTCCCTA CGACTACCTG GTGTCGGCAC TGGGAGCTTG TACCGGCATG
ACGCTCCGGA TGTACGCCGA CCGCAAGGGA TGGCCGCTGG AGTCCATCAC CGTGCGGCTG
CGGCATCGCA AAATCCACCG TGATGATTGC CGGGATTGCG AGGATGGGAG CAGGACGATC
GATTCCATCG AGCGGGAGAT CGAACCCTCC GGCCCTCTTG ATGATGCTCA GCGGCAGAAG
CTGCTCGAAA TTGCGAACAA GTGCCCGGTG CACCGCACAT TGCATTCGAT GGTCGAGGTC
AGATCGCACC TGAAAGAGCC GCCGCCGGCT CGAAACGGCG TTGAATGA
 
Protein sequence
MHFQKLVFRN ADGKNLSARL DLPADEKPLT YAIFAHCFTC TKNFNAVVNV NRALSSRGIA 
VLRFDFTGLG ESEGDFSETN FSTNVSDLVA AARFLESHFE APRLLLGHSL GGAAVLQAAA
LIPSAMAVAT IAAPSDLAHV AELLGGSRAE IKARGEAEVR LAGRDFVIRR QFLEDLEEKR
MEQTIRDLRK PLLIMHSPLD SIVSVDNAAR IFQAAGHPKS FVSLDTADHL LSNRADSLYA
GSVLAAWASR YLEMPETTAA LRDLTDNRVV ARTGRTGYRT EILANGHRLI ADEPIAVGGA
DTGPTPYDYL VSALGACTGM TLRMYADRKG WPLESITVRL RHRKIHRDDC RDCEDGSRTI
DSIEREIEPS GPLDDAQRQK LLEIANKCPV HRTLHSMVEV RSHLKEPPPA RNGVE