Gene Sfum_4033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4033 
Symbol 
ID4457627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4900849 
End bp4901181 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content53% 
IMG OID639704804 
Productanti-sigma-factor antagonist 
Protein accessionYP_848134 
Protein GI116751447 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTGG ATGAAAGGAA AGAGAACGGA ATCACCATTC TCGTCCTGAA AGGGCGCCTT 
GATTCGAATA CATCCGACCA ATTCGGAGAA AAACTGTACA GCCTGATCCA GGCCGGAGAA
AACAAACTGG TTCTCGACCT GGGGGGAGTC GACTACATAT CGAGTGCCGG GCTCCGTGTG
ATCATCAAGT CGGTCAAGGA TCTCAAACGC ATCGACGGGC AGCTCTGCCT GTGCTCGATG
AAGGACTACA TCCGGGAGAT TTTCGATCTG TCCGGTATTG CGACGATACT CCCGATACAC
CCAACCCTGG AAGAATCGCT CCACGCCCTC TGA
 
Protein sequence
MEVDERKENG ITILVLKGRL DSNTSDQFGE KLYSLIQAGE NKLVLDLGGV DYISSAGLRV 
IIKSVKDLKR IDGQLCLCSM KDYIREIFDL SGIATILPIH PTLEESLHAL