| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3991 |
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| Symbol | |
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| ID | 4457670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4844310 |
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| End bp | 4845971 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639704762 |
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| Product | signal transduction histidine kinase regulating citrate/malate metabolism |
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| Protein accession | YP_848093 |
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| Protein GI | 116751406 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00164194 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTTCCG GGTATCCGAA ACTATCCGGC CTGATTCGTA TTGGCTTGCA GCTCAAGCTG
ACCCTTTTGG TCATCGCACT TCTCTGTCTC CTGGTCGTTT TTATCGGACT GCTTTCAACC
GATTCAATCC GCCGTATTTT GCTGAGCGAA ATAGGTCAGA AAGCACTCGT CCTGGCACAA
TCGGTAGCCC GCAACCCGGT AATGCGCGAA GGTCTTCAAA CCAAAAATTC CGCGGCTGTT
CAGGAACTCG CGGAGAAAAT TCGCCAGGCC ACTGCAGCGG AATATGTCGT CGTCTGTGAT
CGCCAGGGGA CCCGATACAG CCATCCCAAT CCGGAAAATA TCGGGAAGAC CTTTGCGGGG
GGCGATTTTC ATCCCGTCGT GGAGATGGGA AGCGCCTATG TCTCACAGGC TGTGGGGACG
TTGGGACCTT CGACGCGTGC CTTTGTCCCG GTACTCGGAG ATCAGGGGGA GGTAATCGGC
TTCGTGGCTG TAGGGTACCT GGATACGGAA ATAGAGAAAC AAGTCGGCGT CCAACAGCGG
AAAATTCTGG GATATGCGGC GGTCGTCCTG TTTTTTGGAG TTTTCGGCGC TGCGGTCATT
GCCAAGAAAT TCAAATCCGC CATCTTCGGG CTTGAACCGC ACGAGATCGC CACATTGTTC
GAGGAACGAA ATGCGATAAT TGAGGCCATT CGCGAAGGGG TTGTGGCCGT TGACAGGGCA
GGGCGCCTCA GATTTGTAAA TCAGGCCGCA CGGCGCTATC TGGGACAGTC CCCCGATGAG
GAACTGGCAG GGTGTCTTCT GACCGATCTC TGCCCATGCG GTGAAATGGA GAATGCGCTC
CTGCAAAAAG AAAAAATACT GGACCAGGAG ATTTCTGTCG CAGAACGCAC GATGGTGGTC
AACGTGCTCC CCTTCGAAGT ATCCGGTAAT GGGTCCGGAG CGGTCGCGAC CTTTCGCCCC
AAAGACGAAA TCGACAATCT TGCGCGAAAG CTCCTGCACA TGCAGGAATA CTCTGAGTTG
CTGCGTGCAC AGACACATGA GTACTCGAAC AAGCTGCACA CAATTGCGGG GCTGATCCAG
ATCGGAGCGC ACCATGAGGC GCTTGATCTC ATTCTTACCG AGTCGAGCGG GTATCAAGAC
CTCGTAAAGA CACTGGCTGA AGCGGTCCCC GATCCCGTCA TTGCCGGCCT GATTCTTGGG
AAATTCAACC GGGCGCGCGA ACTCAAGGTA GAACTCAAAC TTGAGCCTGA CAGTTCCTTT
TCCGATCTGC CGGCCGAGAT CGAGCGGGGA AGCCTGGTCA CGATAATCGG CAACCTGCTG
GACAACGCCT TCGAGGCGGT GCGCTCGTAC GGGCAAGATT GTGAGGTCCG GCTCTTCTTT
ACCGACCTGG GCTTGGATTT GATTATCGAG GTTGAAGATT CCGGCCCGGG AGTCCCCCCT
GAAATTGCGG ACAGATTGTT TGAAAAGGGA GTTACCACAA GCATCGGTCA GGGACGCGGA
ATGGGGCTCT ATCTCGTTCA AAAAGCTGTT GCGGCGCTCG GAGGCTCGGT TACTTTCTCC
ACGGGTGAAC TGGGCGGGGC GCTTTTTACG GTCACTATCC CGAAAAATTG CGCCGGACTG
TACGACAAGA ACATGCTGTC CGGGCAAAAG GGAACGGTTT GA
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| Protein sequence | MISGYPKLSG LIRIGLQLKL TLLVIALLCL LVVFIGLLST DSIRRILLSE IGQKALVLAQ
SVARNPVMRE GLQTKNSAAV QELAEKIRQA TAAEYVVVCD RQGTRYSHPN PENIGKTFAG
GDFHPVVEMG SAYVSQAVGT LGPSTRAFVP VLGDQGEVIG FVAVGYLDTE IEKQVGVQQR
KILGYAAVVL FFGVFGAAVI AKKFKSAIFG LEPHEIATLF EERNAIIEAI REGVVAVDRA
GRLRFVNQAA RRYLGQSPDE ELAGCLLTDL CPCGEMENAL LQKEKILDQE ISVAERTMVV
NVLPFEVSGN GSGAVATFRP KDEIDNLARK LLHMQEYSEL LRAQTHEYSN KLHTIAGLIQ
IGAHHEALDL ILTESSGYQD LVKTLAEAVP DPVIAGLILG KFNRARELKV ELKLEPDSSF
SDLPAEIERG SLVTIIGNLL DNAFEAVRSY GQDCEVRLFF TDLGLDLIIE VEDSGPGVPP
EIADRLFEKG VTTSIGQGRG MGLYLVQKAV AALGGSVTFS TGELGGALFT VTIPKNCAGL
YDKNMLSGQK GTV
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