Gene Sfum_3972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3972 
Symbol 
ID4457686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4825168 
End bp4826802 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content61% 
IMG OID639704743 
Producthypothetical protein 
Protein accessionYP_848074 
Protein GI116751387 
COG category[S] Function unknown 
COG ID[COG4805] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.220987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.634668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAGT ACCAGCCGGA ACTGACCGAT GAATACTTCG ATTACCTGGC CCAGCGTTTC 
CCGGTGATGT GCGCCAGCGA CGAATTCCAC TTTCTTCCCC GGGCGGTGGC GGCGAGCCGG
CACTACGACC GGCTGGACGA CTTCGACCGC GCCGGAATCG AGGAATGCAT CGCCACGATC
GAGGAGTATC GGCGCAAATT CGGCCGTCTG GCCGCCGTCG AGAGCGATCC GGAAAAGCTC
ACCGACCTCG AGATGCTCGA TTCCAGTATT GCCGGCATCC TGATCGAACT GGACTCCAAG
GAGGTGTGGC GGCACGATCC CCTCCTCTAC CTCAAAATCG CCTTCATCGG GCTCGATCAT
TCGTTGACCA AACCTACCCC GAGCCACGAT GAACGGCTGC AAAGAACCCG GGCGCGCCTC
CAGGCGATTC CCCGCCTGCT CCAACAAGCT GCGGAAAATA TCGACCGGGT GGCCCACAGC
ACACTCCAGG CCGCGCTCGC CATGCTCGTC GATTGCCGGA GCTATCTTTC CGAAACCGCC
GATACGTATG TGCCCCAGGA TTCCGGACGA TTCACGGCCG CTTTGGAGAA GACCCGATCC
GCCCTGGACG CGTTCGGGAC ATTTCTTGGC GCGGTCAGGT CCGTTCCGGA CCGCGAGTTT
GCCTTCCGGA GCCTGGAGGT CACTCTGCGG GACAGATTCC GATCGCATCG GAGCCTGTCC
GAAGTGGATG AGATCGCCGT CGAGGAATGG CGCGAGAACC TTTGCCGCCT GGAACGCCTG
CAAAGGAAGA TCGACCCCGG GAAATCCTGG AGAGAGCTGT ATCATGGATA CTTGCCGGAA
GACGCGGCCG GTCGTGACAC CCTGGTGCTC TATGACCGCG AGATGAAAAG GCTGAAGCGT
TTTTTCGAAT CGCACGGCTT CAGCGAGGTC ATGCCGGCGG GGTGGCCGGT GGTCTGTCGG
ACCCCCACTT ACCTGCAATC CGTGCGGGGC TCGGCATCCT TCAGCGCCGC CTTTTCGAGG
GACGGGACCG AAGAGGATTA CTTCTACATT ACGACCCAGG CCTCCGGACA GGGGCGCGAC
CGATCAGCGG AGCTTCTCAG GAAGCGGTTT CACCGGGAGT ATAAATTCCT CGCCGCCCAT
GAGACCTTCC CGGGGCACTA CCTGCTGGAT TCCACCCGGA GAATGCTCGA CAATCCAGTG
CGAAGCCAGA TCGAATCGGC ACTTTTCTAC GAGGGCTGGG CCTATTACGT GGAATCACTC
CTGACCGAAT ACGGGTACGC CGATCATCCC CTGGACCTGC TGGTCGACTG CAAACGGAGA
CTCTGGAGGG CCGCGCGTTG CCGGATCGAC ATCGGGCTTC ATTCTGGGAG ACTGAGTCCC
GACGACGCCC TGGGTCTGTT GACAACCGCC GGGTTCGGCA TGGAGGAAGC CTGCGGACAA
ATCAGTCGCT TTCGGCTGAA TCCCGGCTAT CAACTCTGCT ACAGCCTGGG TCGATTCGAG
ATCATGCGAC TCAGAGAGAC TTACGCGGGC GGAATGGGGC ACGACGGGTT TCACCGACTG
ATGCTCGAAG GCGGTGAACC GCCGTTTCAT GCGATCGAGA AGCGGCTCCG GAATGCGGTG
AATGCCACCC CATAG
 
Protein sequence
MPEYQPELTD EYFDYLAQRF PVMCASDEFH FLPRAVAASR HYDRLDDFDR AGIEECIATI 
EEYRRKFGRL AAVESDPEKL TDLEMLDSSI AGILIELDSK EVWRHDPLLY LKIAFIGLDH
SLTKPTPSHD ERLQRTRARL QAIPRLLQQA AENIDRVAHS TLQAALAMLV DCRSYLSETA
DTYVPQDSGR FTAALEKTRS ALDAFGTFLG AVRSVPDREF AFRSLEVTLR DRFRSHRSLS
EVDEIAVEEW RENLCRLERL QRKIDPGKSW RELYHGYLPE DAAGRDTLVL YDREMKRLKR
FFESHGFSEV MPAGWPVVCR TPTYLQSVRG SASFSAAFSR DGTEEDYFYI TTQASGQGRD
RSAELLRKRF HREYKFLAAH ETFPGHYLLD STRRMLDNPV RSQIESALFY EGWAYYVESL
LTEYGYADHP LDLLVDCKRR LWRAARCRID IGLHSGRLSP DDALGLLTTA GFGMEEACGQ
ISRFRLNPGY QLCYSLGRFE IMRLRETYAG GMGHDGFHRL MLEGGEPPFH AIEKRLRNAV
NATP