Gene Sfum_3960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3960 
Symbol 
ID4457709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4815410 
End bp4815919 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content55% 
IMG OID639704731 
Producthypothetical protein 
Protein accessionYP_848062 
Protein GI116751375 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGAAAT GGTACGCGGA AGACCTCAAG AAATTTGAGA TCGTCACCAT TTTCGACGTC 
CTCATGGAGT ACCTCAAGTC GGGACGCATC AAGGTCGATC CTGCCCTGCA TTCCGAGCTC
ACCACCTATC ACGATCCATG CAACTACGGA AGGAAGTCGC TGAAGGCATT CGGGATCGGC
TATTTCGAAG AGCCGCGATG GATCGTGCGG CAGTGCTGCC CGAACTTCAC CGAAATGTAT
CCCAACTTTG AAGGCAACTA CTGCTGCGGC GGCGGCGGCG GCGCCTGGGC CCTGCCCTTC
CGCGAGGAAC GCGTCTTCTA TGGTCGTATC AAGCAGCGCC AGATCAGAAA CACCAAGGCC
AAACTGGTCG TCACATCCTG CCACAACTGC CGGGACCAGA TCATGAAGAG CCTGCGCAAG
GAATACGACC TTGACGTCGA AGTCAAATAC ATCTGGGAAC TGGTGGCCGA CGCCTTGATC
CTGGAACCCG AAAAATCTGA AGAGGAGTAA
 
Protein sequence
MEKWYAEDLK KFEIVTIFDV LMEYLKSGRI KVDPALHSEL TTYHDPCNYG RKSLKAFGIG 
YFEEPRWIVR QCCPNFTEMY PNFEGNYCCG GGGGAWALPF REERVFYGRI KQRQIRNTKA
KLVVTSCHNC RDQIMKSLRK EYDLDVEVKY IWELVADALI LEPEKSEEE