Gene Sfum_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3931 
Symbol 
ID4457751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4788565 
End bp4789767 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content62% 
IMG OID639704704 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_848035 
Protein GI116751348 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.543045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGGT TGAAGGGTTG TCCCGTCAAC GTTTCGGAAT CCAATTACCG AGGGGAGCGG 
ATCATGCATT TCAAACTGAC GGAAGAACAG GAACTGGTGA GGGCCGGAGT CCGGGAGTTT
TGTCAAAAGT ACGTGGAGCC CATCGCCGAG GAAGTGGACA TGGAGCCGCG TTTTCCGATG
GAAAACATCA AGCGCCTGGC CGAGCAGGAC TGGTGCGGCA TTCCCTACCC GACGCAGTAC
GGGGGGGCGG GGGCCGACTA CCTGACCTAC ACGATTGTGG TCGAAGAGCT ATCGCGGGCG
TGCGCGGCAA CGGGATTCAC TCTCGAATGC CAGACCTCTC TGGCGAGCTT TCCCCTGTTC
AAGTTCGGGA CCGAGGAGCA GAAGCAAAAG TGGCTGACCC CGCTGTGCAA GGGGCAGATT
CTGGGCTCGT TTGCGCTGAC CGAACCGGGG GCGGGCACGG ATGTGGCCGC GGGGAGCACG
ACCGCGGTGC TCGACGGAGA CTCCTATGTG TTGAACGGCA CGAAGATGTT CATTTCCAAC
GCACCGGTGG CGGGGGTGTT CATCATTTTT GCGAGCACGG ACAAGTCCAA GGGGCCCAAG
GGTCTGAGCG CGTTCATTGT GCCGGCGGAC ACGTCGGGGA TCAAGCCCGG GGAGCACTTG
AACAAGATGG GGATCCGCGG GGCGCTGACC TCCGAGGTGG TCTTGAAAAA CTGTCGTATT
CCGAAGGGGA ACCTGCTGGG AGGAGAAGGC CAGGGGTTCA AGATCGCCAT GATGACCCTG
GACGGCGGGC GCATCGGGAT CGCGGCGCAG GCGTTGGGGA TCGCTCAGGC GGCCCTGGAT
GAGTCCATTC ACTATTCCAA GGAGCGGGTC CAGTTCGGAA AGCCCATCAG CTCCTTCCAG
GCCATCCAGT GGATGCTGGC CGACATGGCC ACGGAGGTCG AGGCCTCGCG GTTTCTGACC
TACCACGCCG CCTGGTGTTA CGACCAGGGG CTGCCCTACA GCAAGGAGGC GGCCATGGCC
AAGCTGCACG CGGCGGAGAC GGCGGCGCGG CAGACCAACC GGGCGATCCA GATCCACGGG
GGCATCGGGT TCATCAAGGG TCACAAGGTG GAGCGGCTGT ACCGCGACGC CAAGATCACC
GAGATCTACG AGGGCACCTC GGAGGTCATG CGCATGGTGA TCTCGGGCAG TATTCTGCGC
TGA
 
Protein sequence
MSGLKGCPVN VSESNYRGER IMHFKLTEEQ ELVRAGVREF CQKYVEPIAE EVDMEPRFPM 
ENIKRLAEQD WCGIPYPTQY GGAGADYLTY TIVVEELSRA CAATGFTLEC QTSLASFPLF
KFGTEEQKQK WLTPLCKGQI LGSFALTEPG AGTDVAAGST TAVLDGDSYV LNGTKMFISN
APVAGVFIIF ASTDKSKGPK GLSAFIVPAD TSGIKPGEHL NKMGIRGALT SEVVLKNCRI
PKGNLLGGEG QGFKIAMMTL DGGRIGIAAQ ALGIAQAALD ESIHYSKERV QFGKPISSFQ
AIQWMLADMA TEVEASRFLT YHAAWCYDQG LPYSKEAAMA KLHAAETAAR QTNRAIQIHG
GIGFIKGHKV ERLYRDAKIT EIYEGTSEVM RMVISGSILR