| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3923 |
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| Symbol | |
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| ID | 4457743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4779416 |
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| End bp | 4781125 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639704696 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_848027 |
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| Protein GI | 116751340 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.19723 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTCAA CCTCCGCACT TTCCGCCCGA ACGACGGCCG AATGCCGTCG CCAGACCATC
ATCCGCCCTT TCTGCCGGCT CGGTCACCCG TGGCTTTCGA GCGCGATGCG GTGTGTGTCC
GCGCTCATGC TCCTGGCGGC GACACTGGGA GCCGCGGGTT GCACGGCAGT GGGTCCCGAT
TTCGCCAAAC CATCGGCGCC GGTAGCTGCA AACTGGAGCG AAAAGGACAA CTCGAAGGTC
AAAACCGAGT CGGGAGACTA CAGCCAGTGG TGGACCGTCT TCGAAGACGA GGTCCTGAAC
AACCTGATCC GGATCGCCTA TGAGAACAAC CCGGATCTTC AGGTTGCGGG GCTGCGCATT
CTCGAGGCGC GCGCTCAGCT GGGCATCGCG CTGGGAAACC AGTTCCCTCA GAAGCAGCAG
GGCAACGCCG CGTATACATA CACCCGGAAC AGTGAAAACG CCGCCAATAC TGCCGGCGGC
GGTGACCTGA GATACGGGGC TTACAATTAC GGAATCGACG CGTCGTGGGA AATCGATTTC
TGGGGCAAAT ACAAGCGCGG CATCGAATCC GCTGACGCCA GCCTGACGGC GTCCGTGGCT
GATTACGACA GTGCCCTCGT CTCCTTGGCC GGCAACGTGG CGTCCACCTA TGTCCAGATC
CGCACCTACG AGGAACGGCT CAAGGTGGCG CGTGAGAACG TCGAGATCCA GAAGGAGTCG
CTTCGGCTCA CCGAAGTCAG GTACCGCAAC GGAGCCGTGA CCGAGCTGGA CGTGCAGCAG
GCCAGAACCC TTCTTTATGA CACTCAGGCC CAGATCCCCT CTCTGGAGAT AAGCCTCCAG
CAGTCCAGGA ACAGTCTTGC CGTCCTGCTG GGGATGCCTC CGGGCGACCT GGCCGGGCTG
CTCGGCGACA AACCCGGGAC CATCCCGACT CCGCCGGCCG AGGTTGTCCT CGGGATCCCC
GCGGAGCTCC TGCGCCGCCG GCCCGATATC CGTAGCGCCG AGCTCCAGGC CGCCGCGCAA
TGCGCTCAGA TCGGCGTTGC CAAAGCCGAG CTCTTTCCCC GTATTTCCCT GCTGGGGTCG
TTCGGGTTTC TTGCTAGCGA TTCACGCCTG ACCAGAACCG GCGGGAGCGG TTTCACAGAT
CTCTTCACCT GGAGCAGCTA CACCATGACC ACCGGTCCCA CCATCGAATG GCCGATCCTG
AACTACGGCC GCATCACGAA CAACGTGCGG GTCCAGGATG CGCGCTTCGA GCAACTGATG
GTCACCTACC GGAACACGGT GCTCGGTGCG GCAAAAGAAG TGGAAGACGC CCTGGTGGGT
TTTCTGCGCT CCCAGGATAA GACCGCTCTT TTGGAGGAAA GTGTGAAAGC GGCCAAACGG
GCGGTGGATC TCGCCATGTT GCAGTACCGG GAGGGTGCGG TCGACTTCAC CACCGTGCTC
AATTCGCAGC AGTCACTCGT CCAGGAACAG GACAGCCTCA CCCAGAGCCG GGGCGCGGTG
CCCACGAACC TGGTGGCGCT CTACAAGGGA CTCGGCGGCG GGTGGGAGCT CAGAGCGGGA
AAGGACTTCG TCCCGGCGGA GACGGTGCGG GTGATGAGAG AAAGGACCAA CTGGGGCGAT
CTGCTCCCGG TGAAGGGGGG ACTTCCAGCC GATCTCGAGC CCCCTCCTCC ATCCAACGTC
AGGGAATTGC CCCGGCCGCC TGATTGGTAG
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| Protein sequence | MRSTSALSAR TTAECRRQTI IRPFCRLGHP WLSSAMRCVS ALMLLAATLG AAGCTAVGPD
FAKPSAPVAA NWSEKDNSKV KTESGDYSQW WTVFEDEVLN NLIRIAYENN PDLQVAGLRI
LEARAQLGIA LGNQFPQKQQ GNAAYTYTRN SENAANTAGG GDLRYGAYNY GIDASWEIDF
WGKYKRGIES ADASLTASVA DYDSALVSLA GNVASTYVQI RTYEERLKVA RENVEIQKES
LRLTEVRYRN GAVTELDVQQ ARTLLYDTQA QIPSLEISLQ QSRNSLAVLL GMPPGDLAGL
LGDKPGTIPT PPAEVVLGIP AELLRRRPDI RSAELQAAAQ CAQIGVAKAE LFPRISLLGS
FGFLASDSRL TRTGGSGFTD LFTWSSYTMT TGPTIEWPIL NYGRITNNVR VQDARFEQLM
VTYRNTVLGA AKEVEDALVG FLRSQDKTAL LEESVKAAKR AVDLAMLQYR EGAVDFTTVL
NSQQSLVQEQ DSLTQSRGAV PTNLVALYKG LGGGWELRAG KDFVPAETVR VMRERTNWGD
LLPVKGGLPA DLEPPPPSNV RELPRPPDW
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