Gene Sfum_3915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3915 
Symbol 
ID4457735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4768237 
End bp4769568 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content65% 
IMG OID639704688 
ProductMOFRL domain-containing protein 
Protein accessionYP_848019 
Protein GI116751332 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2379] Putative glycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.470316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGACA AGCAGCGCCG TGCGCTCACT GAAATCCACC TTGCGGGGCT TCGGGCCGTG 
GAGCCGGAGA ATGCCGTGAA AGTTCACCTT CGGCGGTCCG GTAACGATCT CCACGTGGGA
GAGCGGTCCT ACGCCCTGGA TGATTTCGAG AGGATCATTC TGGTGGGAGC CGGGAAGGGG
GCCGCTCCGA TGGCCAAAGC GGTCGAGGAC GTTCTTGGCG ACCGGCTCGC CGCCGGATGG
ATTACGGTCA AATACGGTCA CGGCCTCTCC CTGAAAAAAA CCCATGTCAT GGAGGCCGGC
CATCCGATTC CGGACGAAGC GGGGCTCGAG GCGACTCGAA CGTTGCTGGC CCGGCTCGGG
GAATGCTCGG AGCACGATCT GGTCGTCGGG GTCTTTTCCG GCGGAGGTTC CGCTCTGCTT
CCCGCGCCAT GTCCGGCCGT CTCCCTCGAG GAGAAAAAGG AGATCACTCG GCTGTTGCTG
GAATGCGGTG CATCCATCGA TGAGATCAAC GCCGTCAGGA AGCATCTGTC GCGAAGCAAA
GGGGGAGGCC TCGCCAAGGC GGCTCATCCG GCGACGGTGG TTTCCCTCCT GCTCTCGGAT
GTGATCGGCG ACCGGCCGGA TGTGATCGCC TCGGGTCCCA CCGCACCGGA TGTCAGCACC
TTCGCGGACG CCCTCGAAAT CATCGAACGA TACGGCCTCA CGGGCAAGAT CTCCACGAAC
GTTCTCGGGC GCCTGAACGA CGGGGCCGCA GGCAGACTGG AGGAAACACC CAAACCGGGC
GATCCCCTGT TCGCCGGGCT GCTGAACCTG GTCGTCGGGA ACAACCGGGC CGCGCTGAAC
GCCGCCGCCG ACAGGGCACG TGCCCTCGGC TTCCATACGC TGGTCCTTTC CTCCGGCATC
CGGGGCGAAG CCAGGGAAGT GGCGAAGGTT TTCGCGGCTG TCGGAAGAGA AGTGATCGAG
GCGGGGCATC CGGTTGCCGC TCCGGCGTGT ATTCTTTCGG GGGGGGAGCC CACCGTCACC
GTTCGAGGCC CGGGCAAGGG AGGCCGCAGC CAGGAACTGG CGTTGGCTTT CGCCATCGCC
GTGGACGGGC TGGACCGGTT GGCGCTGCTC GCCGCCGGCA CCGACGGCAC CGATGGGCCA
ACCGACGCCG CCGGCGCGTT TGCGGATGGG CACACCTGCA GCCGCGCCCT GCGGCTCGGC
CTCATCCCCC GTGAATTCCT CGCCCGTAAT GATTCATACA ATTTTTTTGC GCCGATCGAC
CAACTGTTCA AAACCGGCCC CACGCGAACC AACGTCATGG ACCTCTTCTG CCTGATCGTG
GATCGGGAGT GA
 
Protein sequence
MRDKQRRALT EIHLAGLRAV EPENAVKVHL RRSGNDLHVG ERSYALDDFE RIILVGAGKG 
AAPMAKAVED VLGDRLAAGW ITVKYGHGLS LKKTHVMEAG HPIPDEAGLE ATRTLLARLG
ECSEHDLVVG VFSGGGSALL PAPCPAVSLE EKKEITRLLL ECGASIDEIN AVRKHLSRSK
GGGLAKAAHP ATVVSLLLSD VIGDRPDVIA SGPTAPDVST FADALEIIER YGLTGKISTN
VLGRLNDGAA GRLEETPKPG DPLFAGLLNL VVGNNRAALN AAADRARALG FHTLVLSSGI
RGEAREVAKV FAAVGREVIE AGHPVAAPAC ILSGGEPTVT VRGPGKGGRS QELALAFAIA
VDGLDRLALL AAGTDGTDGP TDAAGAFADG HTCSRALRLG LIPREFLARN DSYNFFAPID
QLFKTGPTRT NVMDLFCLIV DRE