Gene Sfum_3863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3863 
Symbol 
ID4457788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4715718 
End bp4716722 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content60% 
IMG OID639704636 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_847967 
Protein GI116751280 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0343511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATC AACCGCCCTA CACGATTACC CCCGAGATTT TGAACCGGGT CGCCTTGATC 
AGCGAGGTTA TCGGGCGGTT GACCGTGCTC ACCGATCAGG CGAGAGCCTT GCGGCTACGA
CGCATCAACC GTATCCGCAC CATTCACGGC TCGCTGGCCA TCGAGGGCAA TACCCTGAGC
GAGTCGCAGA TCACCGCGAT TCTCGACGGC AAACGGGTCA TCGCTCCGCC CCGCGAGGTG
CAGGAAGTGA AAAACGCCCT GGCTGCCTAC GACCGGTTCG ATACATGGAG GCCCGAGGCG
GAAACGGACC TGCTGGAGGC GCATCGGATT CTGATGTCCG GCCTGATCGA CGAAGCGGGC
AGATACCGGC ATGGCGGTGT GGGGGTAATG GCAGGTCAAC AGTTGATCCA TATGGCACCG
CCCGCCGAGC GGGTGTCGCA GCTGATGGGT GACCTGTTTG GCTGGCTGGC GGTCGCCAAC
GCACACCCAC TCATTGCCGG CTCGGTCTTT CACTACGAGT TCGAATTCAT CCACCCCTTC
GCCGATGGCA ACGGTCGCAT GGGGCGGCTG TGGCAGAGCC TGATTCTCGC CCGCTGGAAT
CCCCTGTTCG CCAACATCCC GGTGGAAAGC CTAATCTTTG AGCACCAGAC CGAGTACTAC
GCAGCGTTGC AGGAGAGTAC CCGTCAGACC GACTCCGCAC CCTTCATCGC CTTCATGTTG
CGGATGATTC TGGTTACCGT GACGACCTCG ACCCCGGAAG TCGCACCGGA AGTTACCCCG
GAAGTCAGAT TGCTTTCGGT CTTGACCTCC GAGATGACAA GGCAACAGCT CAAAAAGGCG
CTCGCGCTTA AAGACGATGA GCATTTCCGC AAGGCCTATC TGCTCCCCGC TTTGGAGGCC
GGTCTGGTTG AAATGACCAT CCCCGATAAG CCGCGCAGCA GCAAACAAAA ATACCGGCTG
ACTGACAAGG GCCGTCGGGT GATGGCCCAG CACGGCGGTG GATAA
 
Protein sequence
MKYQPPYTIT PEILNRVALI SEVIGRLTVL TDQARALRLR RINRIRTIHG SLAIEGNTLS 
ESQITAILDG KRVIAPPREV QEVKNALAAY DRFDTWRPEA ETDLLEAHRI LMSGLIDEAG
RYRHGGVGVM AGQQLIHMAP PAERVSQLMG DLFGWLAVAN AHPLIAGSVF HYEFEFIHPF
ADGNGRMGRL WQSLILARWN PLFANIPVES LIFEHQTEYY AALQESTRQT DSAPFIAFML
RMILVTVTTS TPEVAPEVTP EVRLLSVLTS EMTRQQLKKA LALKDDEHFR KAYLLPALEA
GLVEMTIPDK PRSSKQKYRL TDKGRRVMAQ HGGG