Gene Sfum_3856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3856 
Symbol 
ID4457816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4709977 
End bp4710351 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content51% 
IMG OID639704629 
Producthypothetical protein 
Protein accessionYP_847960 
Protein GI116751273 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0230903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0305359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGATC ATCTGAAGAG CTGGGCCAAA ACGATGAAAC GGGATATTTT GGCCCTATAT 
CTGGCTGGAC GTGATCCAAG GGTCCCTTGG TACGTAAAGT TGTTGGCGGC TGCAACAGCA
GCTTATGCGC TCAGCCCCAT TGATTTGATT CCGGATTTCA TACCCGTAAT CGGATATCTG
GACGACATAA TAATACTGCC GACTGCGATC TGGTTGACGG TGCGGTTGAT ACCGCAAGAG
ATTCTCGCTG AGTTGCGGAA CGAGGCCAGT CTCAGATTGG CGAAACGTCC CCGAAGTTTT
CTCGCAGCAG TTGTCATCGT AACCATTTGG TTGGGGATTG CATTGATGAC AGGCTGGCTG
TTGTGGCGTC GGTGA
 
Protein sequence
MLDHLKSWAK TMKRDILALY LAGRDPRVPW YVKLLAAATA AYALSPIDLI PDFIPVIGYL 
DDIIILPTAI WLTVRLIPQE ILAELRNEAS LRLAKRPRSF LAAVVIVTIW LGIALMTGWL
LWRR