Gene Sfum_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3848 
Symbol 
ID4457808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4698049 
End bp4698510 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content58% 
IMG OID639704621 
Producthypothetical protein 
Protein accessionYP_847952 
Protein GI116751265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0074367 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATGATCC TCGGAATTCG CACTTCCCCG ACGACCGTTC GCTATGCAGT GCTCGATTGC 
AACGGAACGG TTGTATCCCT GGTCAATGCC GACTCGGAAA ACAAACTCGA CTTCCCCGCC
GATTGCCGAA GCATCGAACA GAAACTGCAC TGGCTCCACC AGGAGCTGGA CCGGGTGTTG
CGCCAATATC CGGGCATCGA AAGGATCGTC ATCAAAGCGA ACGAATACGG CCGAGGTGGT
GAGAAGGCTT CCTCCCGGGA AGCCGCCTAT TTCGACGCGG TCGTATTGAT GACAGCGGGC
ACCCGGCAGC TTCCCGTGGA TGTGAAGCTG TACAGGACGA TCGGAACTCG CCGCAACGAG
GTCAAAACGT TCGCGGAGAC CAACGTCGGG GCGACAAACC GCTATTGGAA CGAGCAGATG
GCAGATGCCG TTTCTGCGGC GTGGTCGGGG AGGAACGATT GA
 
Protein sequence
MMILGIRTSP TTVRYAVLDC NGTVVSLVNA DSENKLDFPA DCRSIEQKLH WLHQELDRVL 
RQYPGIERIV IKANEYGRGG EKASSREAAY FDAVVLMTAG TRQLPVDVKL YRTIGTRRNE
VKTFAETNVG ATNRYWNEQM ADAVSAAWSG RND