Gene Sfum_3827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3827 
Symbol 
ID4457822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4672923 
End bp4673186 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content66% 
IMG OID639704600 
ProductPAAR repeat-containing protein 
Protein accessionYP_847931 
Protein GI116751244 
COG category[S] Function unknown 
COG ID[COG4104] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.86819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCC AGGCGCGACT CGGCGACATC AGCAGCCACG GCGGCGTCAT CATCACCGGG 
GCGAGCCGGA CGCTGGACAA CGGCATGCCG GTGGCCCGTA TGGGGGATCT GCACGTCTGT
CCCATCCCTG GGCATGGCGT GACGCCCATC GTGACCGGCA GCTTCGACAC CATCACCGAA
GGATTGCCCA ACGCCCGCAT CGGCGACATC ACCGCCTGCG GAGCCATCAT CGTCACCGGC
AGTCCCGACA CCATCGACAA CTGA
 
Protein sequence
MSSQARLGDI SSHGGVIITG ASRTLDNGMP VARMGDLHVC PIPGHGVTPI VTGSFDTITE 
GLPNARIGDI TACGAIIVTG SPDTIDN