| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3745 |
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| Symbol | |
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| ID | 4457912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4576271 |
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| End bp | 4578937 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639704519 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_847850 |
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| Protein GI | 116751163 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAGCG ACAAATACGT CAAGAGGGTA CTACTGGTCC TTGCGGCTGT ATTCACGATG
GCTTGGGGGG CACACGCCCA GGAGCAGAAT CCGAGAGTCG CCATACTTCC TTTCGTCGTT
CACAGTCCGA AAGATCAGGC TTCGATCCAG AAATCCGTGG AGGAAACTCT GGTCCGCATC
GCCGCCACCG AAGGCGTGAA AGTTGTCGAC TCCGCGGAAG TCCGCAAGGT CGTCAAACCG
GGCGAAGCCC CGCGCACCGA AGAGCAGGCG CGGGCCCTGG GGCGCAGACT GGGGGCCGGT
TACGTTCTGT TCGGCAGCTT CAATATGCTC GGCAACACCA TCAGTCTCGA TGCAAAGCTG
AGCGATGTGT CCGGGCAGAA AAGGACGGCG AATCTGTTCG CCGAGGAAAA GGGAATCGAA
AACCTGGCGG CGGCGAGCAG CCGGATCGTG CAGCAGATGA CCATGGCAGC GACGTCCAAG
GGCGTCATCG CGGATATCAA GGTCCGGGGC AACGACCGGA TTGAAGCCGA TGCCATCAAG
GCCGCCGTCA AGAGCAAGAA GGGGGAAGGG ATCCGCCCCG GGCAGGTTCG GGAGGACATC
AGGGCCATCT ACAAGCTGGG GTATTTCGAA AAGGTCGACG TGGAGGAATC GGATTCGCCC
GCCGGCAAGG TCCTGACTTT CGTCGTTCAG GAAAATCCCA CCGTCCAGGA AGTGCGCATC
GCGGGGAACA AGAAGATCAA GGAGAAGGAC ATCCTGGCGG CCATCGGCAC CAAGGCGTAT
ACGATCCTTC AGGAGACCAC GGTGACCGAA GACGTCCAGA AGATCCTCAA GCTTTACCAG
CAGAAGGGCT ACTTCGCCGC GGACGTGAAG TCGTCGATCA CCTTCCCGAA GGATCCCCGA
AAAGCAACGG TCGCTTTCGA CATCAAAGAG CACAAGAAAA TCTGGATCAA GAAAATCAAC
TTTCGCGGAA ACACTCACAT CTCCGCGCGG AAATTGCGCG GGGTGATGCA GACCAAAAAG
AAGATGTTCC TCATTTCCAT GATCTCCGAA CGCGGGATTC TCCAGAAGGA AGTGTTGGAT
ACCGATGTCG ACCGCCTCAC CGTCTTTTAC CACGATGAGG GGTATATGGA CGCGAAGGTG
GGCACTCCCG AGGTGGTTCG CAAGGACGAC GGGTTTTATA TCGAAATTCC AATCGAGGAA
GGGGCGCGAT ACAAGGTCTC GTCGGTGAAG CTGAGCGGGG ATATGATCGA AGGCACCCCC
GCCATGGAAA AAAAGATGGA CGTGCGCGTG AAGGACCACT TCAGCCGGGA GAAAGTCAGG
CATGACATGG ACCTGATTTC CAAGACCTAT ATGGACGACG GCTACGCGCA CACGGAGGTC
GACCCCGCCA TCCAGCGGGA TACCGGCACC AAGACGAGCG ATATCGAGTT CAGAATAAAG
AAAAACGAGC AGGTGCACAT CGGAAGGATT TTTATCACGG GCAATACCAG GACCCGCGAT
TACGTGATTC GGCGCGAGCT GAAGATTTTC GAAGGGGATA TGTTCAGCGC CAGCAAGATA
GAGAAGAGCC TCTCCCGGCT GAAGAAGCTG GATTATTTCG AAGATGTGCA GATCGTGCCG
CTCGATACGG AAACGTCCAG CGTCATGAAC CTCCAGGTCA AGGTCAAGGA GAAGCTGACC
GGGTCGATCA GCGTGGGCGG CGGCTTCTCG TCCGACGACG GTTTGTTCGC CAGCGGCGCG
GTCATGGAGC GGAACCTCTT CGGGCGGGGC CAGACGATCG GCGTCAAGGC CTACTTCGGG
GAGGAGGCGC AGCGCTACAT CTTCAGTTTC ACCGAACCAT GGTTGTTCGG CTACCAGGTG
GCCGGGGGCA TCGATCTGTA CAACTGGCTG CGCGATTACG ACACTTTCGT CAAGGATTCC
ACCGGATTCA GGCTTCGCAC CGCCTATCCG TTCGGTCAGT ACAGCCGGCT GCTGGCGTAC
TACTCCTGGG AAAGAGCGCA CGTGACCGAT GTGAGCGTCG ATGACCCGTA TATCCAATCG
CAGGTCGGGT GGACCACTCT GAGCGCGTTC ACCCTGGGAT TCGAAAGAGA CACCACCGAT
CATCCGTTCC TGCCGACCAA GGGAACCGTC CTCGCGGCGA CCGGCCAGTA CGCCAGCCCG
GCTTTCGGCA GTGACAGCAA CTTCTTGAAA TATGAAATGC ACGCGGGTGT GTACGTCCCG
CTGCATGTCT GGAAATTCAT CGGGTTTCTG CGCGGCGAAT ACGGGTATCT CTATCAGATC
GATCCCGTTG ACAATCCGGT TCCCATCTAT GAAAGATTTT TCCTGGGAGG CATCAACAAC
CTGCGCGGTT TCAACTGGGG GGATGTCGGC CCCCGGGATG CCTACGGGAA TGTCGTCGGC
GGTGTGAAGT ACGGAGTGAT GACCGCGGAG TTGCTTTTTC CCATAGCCGA GAAGATGGGG
ATTCGCGGAG TGGTCTTCTT CGACGCCGGA AATGCGTTTA CCGGAGACCA GAGTTTTGAT
GTCTCCAAGT TTCGGACCGA CGCCGGTGCC GGTATCAGGT GGAACTCTCC ATTCGGACCG
CTCAGGATGG AAATCGGTAT AAACCTCGAT CCAGAACCGG GTGAAGACAA TTACCAATGG
CAGTTTTCAG CAGGTGCTTT TTTCTAA
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| Protein sequence | MVSDKYVKRV LLVLAAVFTM AWGAHAQEQN PRVAILPFVV HSPKDQASIQ KSVEETLVRI
AATEGVKVVD SAEVRKVVKP GEAPRTEEQA RALGRRLGAG YVLFGSFNML GNTISLDAKL
SDVSGQKRTA NLFAEEKGIE NLAAASSRIV QQMTMAATSK GVIADIKVRG NDRIEADAIK
AAVKSKKGEG IRPGQVREDI RAIYKLGYFE KVDVEESDSP AGKVLTFVVQ ENPTVQEVRI
AGNKKIKEKD ILAAIGTKAY TILQETTVTE DVQKILKLYQ QKGYFAADVK SSITFPKDPR
KATVAFDIKE HKKIWIKKIN FRGNTHISAR KLRGVMQTKK KMFLISMISE RGILQKEVLD
TDVDRLTVFY HDEGYMDAKV GTPEVVRKDD GFYIEIPIEE GARYKVSSVK LSGDMIEGTP
AMEKKMDVRV KDHFSREKVR HDMDLISKTY MDDGYAHTEV DPAIQRDTGT KTSDIEFRIK
KNEQVHIGRI FITGNTRTRD YVIRRELKIF EGDMFSASKI EKSLSRLKKL DYFEDVQIVP
LDTETSSVMN LQVKVKEKLT GSISVGGGFS SDDGLFASGA VMERNLFGRG QTIGVKAYFG
EEAQRYIFSF TEPWLFGYQV AGGIDLYNWL RDYDTFVKDS TGFRLRTAYP FGQYSRLLAY
YSWERAHVTD VSVDDPYIQS QVGWTTLSAF TLGFERDTTD HPFLPTKGTV LAATGQYASP
AFGSDSNFLK YEMHAGVYVP LHVWKFIGFL RGEYGYLYQI DPVDNPVPIY ERFFLGGINN
LRGFNWGDVG PRDAYGNVVG GVKYGVMTAE LLFPIAEKMG IRGVVFFDAG NAFTGDQSFD
VSKFRTDAGA GIRWNSPFGP LRMEIGINLD PEPGEDNYQW QFSAGAFF
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