| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3723 |
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| Symbol | |
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| ID | 4457975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4538749 |
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| End bp | 4539699 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639704496 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_847828 |
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| Protein GI | 116751141 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA GACTACTCGT CGTATCCGTT CTGCTCCTGG TCTTTGTGGG CACCCTCTGC
TCGGCGCAAG CCGAAGAAGT CAGGCTGATT CTCGGCACGG GAGGCACCGC CGGGACCTAC
TACCCGCTCG GGGGCTCCAT GGCCAAGATC TGGAATTCGA AGATTCCCGG CATGAACGTC
ACGGCACAGA CCACGGGGGC TTCCGCCGAA AACGTTCGCC TGGTGAACAA GAAGGAAGCG
GAGCTCGCGC TGGTCCAGAG CGACACGCTG GATTTCGCGT TCAAGGCCGA GCCTCCGTTC
AAGGAGAAAC TCACGGCCAT GGCGGCCATT GCCGTGCTCT ATCCGGAAGT CATCCAGGTC
GTGGTGCGCG CCGATAAGCC GGTCAAGACC TTCGCCGATC TCAAGGGACT GAAGATGGGC
GTGGGAGCCC CGGGCAGCGG AACGGAGGCG AATTTCCGGC AGCTTTGCGA CGTGCACGGA
CTGGTAAAAG GCGACATCAA CGCCCAGTAT CTTTCCTTTT CCGAGAGCGC CGAACAGTTC
AAGGACAAGC ACATCGACGC CTTCCTCGTG ACGGCCGGTC TCCCCAACCC GGGCATCATG
GACGTCAGCA CCCAGAACGA CATTCGGATC CTCAGCATTT CCGACGATAT GCTGAAGAAG
ATCACGACCA AGTATCCTTT CCTCTCTCCC GTGAAGGTCC CTGCCAATAC CTACAAGAAC
GTCCCCGAAG CGAGCACCGT GGCGGTGAAC GCCGTGCTCA TCGTGAATTC GGGGATCAAG
GAGGACGTCG TCTACAACCT GACCAAGGCT CTGTTCGACA ACCAGCCGGA ACTGGCCGCG
GCCCACGCCA AGGGCAAGGA AGTGAACCTG CAGACGGCGG TCAAGGGTGT GTCCATCCCG
TTCCACCCGG GAGCGGTGAA GTACTACAAA GAAAAAGGCG TCATGAAATA G
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| Protein sequence | MMKRLLVVSV LLLVFVGTLC SAQAEEVRLI LGTGGTAGTY YPLGGSMAKI WNSKIPGMNV
TAQTTGASAE NVRLVNKKEA ELALVQSDTL DFAFKAEPPF KEKLTAMAAI AVLYPEVIQV
VVRADKPVKT FADLKGLKMG VGAPGSGTEA NFRQLCDVHG LVKGDINAQY LSFSESAEQF
KDKHIDAFLV TAGLPNPGIM DVSTQNDIRI LSISDDMLKK ITTKYPFLSP VKVPANTYKN
VPEASTVAVN AVLIVNSGIK EDVVYNLTKA LFDNQPELAA AHAKGKEVNL QTAVKGVSIP
FHPGAVKYYK EKGVMK
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