Gene Sfum_3719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3719 
Symbol 
ID4457971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4533443 
End bp4534810 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content61% 
IMG OID639704492 
Productaminotransferase class-III 
Protein accessionYP_847824 
Protein GI116751137 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID[TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCATCT CCAATGCCGC AAGAAGCCGA CTGGCCGCTC ACGACAAGCA ACATATCTGG 
CATCCGTTCA CACAGATGCA GGAATACGTC GAGGAAAAGC CGCTCATCAT CGAAAAGGGG
AACGGATGCA CACTGTTCGA CATCGACGGC AACGCGTATC TTGACGGCGT CGCTTCGCTC
TGGACCAATG TGCACGGGCA CCGCAAGGCG AAGCTGGACA ACGCCGTCAG GGACCAGTTG
GATCGCGTCG CCCATACCAC CTTGCTCGGT CTTTCGAACG TTCCCGCAAT CAGCCTGGCT
GAAAAACTGA TCGCCGTCGC CCCCCGCGGG CTGACCCGCG TATTCTATTC GGACAATGGT
TCCACCGCCG TCGAGATCGC CTTGAAGATG GCTTTCCAGT ACACTCGGCA ATGCGACGGA
ACCAATGAAA AAACCGGGTT CATCACTTTC CGGAACGCCT ATCACGGGGA CACGATCGGC
TCGGTAAGCG TGGGGGGCAT CGATCTTTTT CACGAGAAGT ACAGCCCTCT GCTGTTCACT
GCCCACAAGG CCGAATCTCC GTATTGCTAC CGCTGCCCTT TCGGCCTTTC TCCTTGCGCC
TGCGGCCTCG AATGCCTCAA CCGCCTGGAA GCCCTGATGC GAGCCCGGGC GCGCGAGGTC
TGCGCGCTGG TGATCGAACC CCTTGTCCAG GGCGCGGCGG GGATACTGGT CCATCCCCCG
GGATTCCTGC GGAAAGTGCG GGAGCTCTGC ACTCGCTACG ATATCCTGAT GATAGCGGAT
GAAGTGGCGG TGGGATTTGG AAAAACGGGC AGCATGTTCG CCTGCGACGT GGAGGACGTC
GCGCCCGACA TGATGACTCT GGCCAAGGGC ATCTCGGGGG GATATCTGCC GTTGGCGGCC
ACCCTCACCA CCGAAAAAAT CTATTCGGGA TTTCTGGGAA GATACGAGGA GTTCAAAACG
TTTTTCCACG GGCACACCTA CACCGGGAAC CCCCTCGCCT GCGCGGCGGC GATCGCCAAC
CTGGAGGTTT TCGAGGAAGA GCGCGTCCTG GAACACGTTC GGGAGATCGC CCGACACATG
GCCGAGCGGC TGGAGTCTTT CCGAACGCTC ACTCATGTGG GCGATGTCCG ACGCATCGGG
ATCATGGCGG GCATCGAGCT GGTGGCGGAC CGTGCTTCCA GACGGCCGTT CGCGCCGGAG
GAGAAAGTCG GTCACCGGGT GATCCTGGAG GCGCGAAGAC GCGGCCTCAT CATCCGGCCG
CTGGGCAACG TCATCGTCCT CATGCCGCCG CTCGCCATCT CCGCCGAGGA GATCGACCGG
CTTTGTCAAA TCACGTTCGA CTCGATCCGG GCCGTCACCG GACCATAA
 
Protein sequence
MVISNAARSR LAAHDKQHIW HPFTQMQEYV EEKPLIIEKG NGCTLFDIDG NAYLDGVASL 
WTNVHGHRKA KLDNAVRDQL DRVAHTTLLG LSNVPAISLA EKLIAVAPRG LTRVFYSDNG
STAVEIALKM AFQYTRQCDG TNEKTGFITF RNAYHGDTIG SVSVGGIDLF HEKYSPLLFT
AHKAESPYCY RCPFGLSPCA CGLECLNRLE ALMRARAREV CALVIEPLVQ GAAGILVHPP
GFLRKVRELC TRYDILMIAD EVAVGFGKTG SMFACDVEDV APDMMTLAKG ISGGYLPLAA
TLTTEKIYSG FLGRYEEFKT FFHGHTYTGN PLACAAAIAN LEVFEEERVL EHVREIARHM
AERLESFRTL THVGDVRRIG IMAGIELVAD RASRRPFAPE EKVGHRVILE ARRRGLIIRP
LGNVIVLMPP LAISAEEIDR LCQITFDSIR AVTGP