Gene Sfum_3712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3712 
Symbol 
ID4457964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4528469 
End bp4529626 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content62% 
IMG OID639704485 
Productaminotransferase, class I and II 
Protein accessionYP_847817 
Protein GI116751130 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.040259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCGG AACGGCTCCG GCAAAGGTTG TTGATGCAGC GGCAGGCGGG TCTTCACCGG 
AATCCCCCGG AGGCGACGGC CCGAGACGGC AAGTATCTTT TCTTCGGCAA TCGGAAGGTG
CTGAACTTCT CCTCGAACGA CTACCTGGGG CTCGGCGCTT CGCCGAAGCT GAGGGAAAAG
GTCGCCGCGA ACTTCCGTCG CTACGGCACA TCCTCTTCCT CGTCGCGGCT GGTCTCCGGC
CATTACGCGC TGATATCCCG CGCGGAGGAA GCCTACGCCC GCCACTTCGG CTACGACGAA
GCCCTGTTCT TTCCCTCCGG CTACCAAGCC AACCTGGGAG TCATTTCAGC GCTGTTCGCG
CAGGGCGACA CGGTTATTTT CGATAAGCAC ATCCACGCCA GCAGCGTGAA GGGCATGGCC
TTGAGCAAGG CGGAATTCCT CGGCTACCGG CACAATTCCA TGTCACACCT CCGCAAGCGG
CTGGAAGCCC GCAAAGACGA CCAGGCGGGC GTTGTGACCG AATCCCTGTT CAGCATGGAC
GGGGATTTTC TTGATGTCGA GGGCATCCGG AAGCTCAAGC GGGAGCACGG CTTCCTGTGC
ATCGTCGATG AGGCTCACGC GTTTGGCGCC CTGGGTGAAA ATGGACGCGG CATCGCGCGA
ACGGTTGCGG ACGTCGCGGT CGGCACATTC GGCAAGGCCC TCGGGCTGTT CGGGGCGTTC
GCGCTACTGC CCGCGGGATA CAAGGAATAC CTGTTCAATT TTTGTTCGCC CTTGATCTAT
TCCACCACCC TTCCCGAAGC TCACGCCGCT TCCGCGCTGG ATCTGCTCGA AATCCTCGGC
GACAGCGACG CCGAAAGGGA CAGTCTGCGC CGAATCAGCG TTCTCATGAG AGAAGCGCTG
CGGGGCGAAG GATTCCATGT GGGCGGAGAC GCGCACATCA TCGTCGTCGA AATCGGCGAT
GAAGCACGGG CCGCCGCCGT TTCGCGCGGC CTGTTCGAGG GCGGCGTGTT CGTCTTCCCG
GCCAGGTACC CGACCGTGCC CATGGGGCGG GCCATCCTGC GGATCGGAAT GACGGCCCGG
CACAGGGAGC AGGATGTGAG CTTCTTCGTC GACGCGCTGA AGGGAGTGTA TGCGAGAACC
CAACCGGAAT CGCGGTAG
 
Protein sequence
MFAERLRQRL LMQRQAGLHR NPPEATARDG KYLFFGNRKV LNFSSNDYLG LGASPKLREK 
VAANFRRYGT SSSSSRLVSG HYALISRAEE AYARHFGYDE ALFFPSGYQA NLGVISALFA
QGDTVIFDKH IHASSVKGMA LSKAEFLGYR HNSMSHLRKR LEARKDDQAG VVTESLFSMD
GDFLDVEGIR KLKREHGFLC IVDEAHAFGA LGENGRGIAR TVADVAVGTF GKALGLFGAF
ALLPAGYKEY LFNFCSPLIY STTLPEAHAA SALDLLEILG DSDAERDSLR RISVLMREAL
RGEGFHVGGD AHIIVVEIGD EARAAAVSRG LFEGGVFVFP ARYPTVPMGR AILRIGMTAR
HREQDVSFFV DALKGVYART QPESR