| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3689 |
|---|
| Symbol | |
|---|
| ID | 4458011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 4501856 |
|---|
| End bp | 4502497 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639704462 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_847794 |
|---|
| Protein GI | 116751107 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGA AAGAACAGAT CATTCACCAG TCTATGAGGC TCTTTTCTCT GCACGGTTTC
CTCAACACGT CCATGCGCGA CATTCTGGAG GCCGCAAACA CGTCCAAGGG CGGTTTCTAC
AATCACTTCA AAAGCAAGGA GGACCTGCTT TTCGCCGTGC TGGGGGAAGC GCGAAGACTT
TGGAAGGAAC GGAGCCTGGC AGGCCTGGAC CAGACCGGAA GCGCCGTCGA AAAGATCAGG
AAGTTCCTCA CCAACTACCG GGACAATTAC CTCGGGGACA GGGACAGTAT TCCCGGAGGC
TGCATCTTCG TGGCGCTGGC CATGGAGTTG GCCGATCAGA AACCGCATCT GGCCCGGGAA
GTGAGCGAAG GGATGTCGGG CCTGAAAAGG ATGATTCTGC GTATATTGAA AGAGGGGATA
GCATCGGGAG AAATCAGGGA AAATGTGAAC GCGCAAGCTG CTGCCGAGCT GATTTTCTCG
GGACTGTTGG GCGCCTCTCT CATTTACAGT GTGGACAAAT CGATCGAGAA CCTGGACCGA
TCCATCGGCA TCTTCATCGA CTATCTCGAC GGGCTGTCCC CTTTGAATCC ATCGGCAAGA
ACGCAAGGAA CCGGTCCACC GAAGCATGAG AGGAGGAAAT GA
|
|---|
| Protein sequence | MRLKEQIIHQ SMRLFSLHGF LNTSMRDILE AANTSKGGFY NHFKSKEDLL FAVLGEARRL
WKERSLAGLD QTGSAVEKIR KFLTNYRDNY LGDRDSIPGG CIFVALAMEL ADQKPHLARE
VSEGMSGLKR MILRILKEGI ASGEIRENVN AQAAAELIFS GLLGASLIYS VDKSIENLDR
SIGIFIDYLD GLSPLNPSAR TQGTGPPKHE RRK
|
|---|
| |