Gene Sfum_3674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3674 
Symbol 
ID4457996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4483027 
End bp4483818 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content59% 
IMG OID639704447 
Producttwo component transcriptional regulator 
Protein accessionYP_847779 
Protein GI116751092 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.400914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGGG GATGGAATAC GGGGCGGGCG GTATTTGCAT TCGGACGGTT CGATGTTTTC 
ATTGTACAAA TCTTTCCGAG CGGAACGATT TCCATGCGTG TTTTGGTGGT TGAAGACGAC
AGACAGATCA CGGATTTCCT TGAACGGGCG TTGACCGAGG CCGGCTTCAA GATCGATGTG
GCCTGGAACG GCCCGCAAGG ATTTGAACTC GCGCTCAAGG AAAGCTACGA CGCCATCATC
ATCGACGTCA TCCTTCCCGT AATGGACGGT CTGGAGATCC TTCAGAAGCT TCGCAATCGC
GGGATCCTGA CGCCCGTGCT GATCCTGAGC GCAAAGGGCA GTGTGAGCGA CCGGGTGAGC
GGCCTGGAGC TCGGGGGAGA CGACTACCTC ACCAAGCCCT TTGAACTGGC CGAGCTTCTC
GCGAGGGTCT GGAGCCTCAT CCGTCGAAGC AAGGTGAACC AGGAGACGGT GCAGCTCAAG
GCCGGCGACC TGTGGCTGGA CCTGGTCAGC CGCCGCGTTT TCCGCGGTGA CGAGGAGTTC
CGGCTGCTGC CCCAGGAATT CGCCCTGCTC GAATACCTGA TGCGCAACAA GGGAAGGGTG
GTCACGCGCG CGGAGATTCT CGAGAACGTC TGGGGCTATA ACTTCGTGCC CGCCACGAAT
GTCGTGGAAG TTCACATCTG CCGGCTGCGC GAGAAACTGG AACGTCCGAA CAAGCCCAGA
CTCCTGCAGA CTTTCCGCAA GGCCGGTTAT GCCCTGGTCG AAGACAGCTC GCCGGGGGAC
AAGGAATCAT AG
 
Protein sequence
MPRGWNTGRA VFAFGRFDVF IVQIFPSGTI SMRVLVVEDD RQITDFLERA LTEAGFKIDV 
AWNGPQGFEL ALKESYDAII IDVILPVMDG LEILQKLRNR GILTPVLILS AKGSVSDRVS
GLELGGDDYL TKPFELAELL ARVWSLIRRS KVNQETVQLK AGDLWLDLVS RRVFRGDEEF
RLLPQEFALL EYLMRNKGRV VTRAEILENV WGYNFVPATN VVEVHICRLR EKLERPNKPR
LLQTFRKAGY ALVEDSSPGD KES