Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3674 |
Symbol | |
ID | 4457996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4483027 |
End bp | 4483818 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639704447 |
Product | two component transcriptional regulator |
Protein accession | YP_847779 |
Protein GI | 116751092 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.400914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACGGG GATGGAATAC GGGGCGGGCG GTATTTGCAT TCGGACGGTT CGATGTTTTC ATTGTACAAA TCTTTCCGAG CGGAACGATT TCCATGCGTG TTTTGGTGGT TGAAGACGAC AGACAGATCA CGGATTTCCT TGAACGGGCG TTGACCGAGG CCGGCTTCAA GATCGATGTG GCCTGGAACG GCCCGCAAGG ATTTGAACTC GCGCTCAAGG AAAGCTACGA CGCCATCATC ATCGACGTCA TCCTTCCCGT AATGGACGGT CTGGAGATCC TTCAGAAGCT TCGCAATCGC GGGATCCTGA CGCCCGTGCT GATCCTGAGC GCAAAGGGCA GTGTGAGCGA CCGGGTGAGC GGCCTGGAGC TCGGGGGAGA CGACTACCTC ACCAAGCCCT TTGAACTGGC CGAGCTTCTC GCGAGGGTCT GGAGCCTCAT CCGTCGAAGC AAGGTGAACC AGGAGACGGT GCAGCTCAAG GCCGGCGACC TGTGGCTGGA CCTGGTCAGC CGCCGCGTTT TCCGCGGTGA CGAGGAGTTC CGGCTGCTGC CCCAGGAATT CGCCCTGCTC GAATACCTGA TGCGCAACAA GGGAAGGGTG GTCACGCGCG CGGAGATTCT CGAGAACGTC TGGGGCTATA ACTTCGTGCC CGCCACGAAT GTCGTGGAAG TTCACATCTG CCGGCTGCGC GAGAAACTGG AACGTCCGAA CAAGCCCAGA CTCCTGCAGA CTTTCCGCAA GGCCGGTTAT GCCCTGGTCG AAGACAGCTC GCCGGGGGAC AAGGAATCAT AG
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Protein sequence | MPRGWNTGRA VFAFGRFDVF IVQIFPSGTI SMRVLVVEDD RQITDFLERA LTEAGFKIDV AWNGPQGFEL ALKESYDAII IDVILPVMDG LEILQKLRNR GILTPVLILS AKGSVSDRVS GLELGGDDYL TKPFELAELL ARVWSLIRRS KVNQETVQLK AGDLWLDLVS RRVFRGDEEF RLLPQEFALL EYLMRNKGRV VTRAEILENV WGYNFVPATN VVEVHICRLR EKLERPNKPR LLQTFRKAGY ALVEDSSPGD KES
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