| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3657 |
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| Symbol | |
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| ID | 4458014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4464499 |
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| End bp | 4465533 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639704430 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_847762 |
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| Protein GI | 116751075 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0134519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACAC GGAATTCTCC CCCTGACCTG ACGTTCCATG TGGACGTCGA GGAAAAGCTC
CGCCGGCTGG ACGTATTCCT CAGCGCCCGG AGCCCGGATT GTTCGCGAAG CCAGGTTCAG
AAGCTGATCC GGGAAGGTCG TGTGACCGTG AACGGATTGC CGGTCAAGGC GAGCTATGAA
ATCCGATCCG GCGACTGCAT CGCGGTGTGG CTGCCGGAGG CCGTCGGGGA GGATTCGCTG
CAGCCTCGGC CCATGCCCCT GGAGATATTG TTCGAGGATG ACGATGTGCT GGTGCTGAAC
AAGGCGCCCG GGGTCATCGT GCATCCCGGC GCGGGGCATG AGGAAGGGAC GCTGGTTCAC
GGTCTGCTGG CCCATTGTTC CAGGCTGGCT TCCCGGGGCG CTCCCAGAAG GCCCGGCATC
GTTCACCGCC TGGACCGCGG CACTTCGGGC GCCTTGATGG TGGCCAAAAG CGAGCGGGCC
TACCTCGAGC TGATCCGGCA GTTCAAGCAC CATGAGGTCG GCAAGGAGTA CCTCGCGCTG
GTGTACGGCA CGATGGCCGG GGCGTCAGGG GAGATACGGA CGGGAATGGG TCGCCATCCG
GTGGATCGGA AAAGAATGGC CGTGCTGGAA AAAGGCGGGC GCGAAGCCGT TTCTCAATGG
AAGGTCGCAG TCGCCTGGGG TGAGGTGAGC CTGCTCAGGG TCGTCATCAA GACGGGGAGA
ACCCACCAGA TCCGGGTTCA TCTGAGCCAT ATGCAACATC CGGTGGTCGG CGACGAAACC
TATGGCGGCG GAAAACGGAA AGCTCGCGCG GTCAAATCCG ATGTCCTGCG AGAGCTGTTG
ATGGAGGTGG ACCGCCAAAT GCTTCATGCG GTCGGATTGG CGTTCCGGCA CCCCGTTTCC
GGAGCGGACC TCTCATTCAC GGCACCGCTG CCGCCCGATT TTGCCGGTCT GCTCGAACGA
ATAAGGATTT CGCTCCAGAA AGAAGGAGCG GGCCGTTCCG ATCCATCAGG GGTTGGGATG
GATAAGCTGC CTTAG
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| Protein sequence | MGTRNSPPDL TFHVDVEEKL RRLDVFLSAR SPDCSRSQVQ KLIREGRVTV NGLPVKASYE
IRSGDCIAVW LPEAVGEDSL QPRPMPLEIL FEDDDVLVLN KAPGVIVHPG AGHEEGTLVH
GLLAHCSRLA SRGAPRRPGI VHRLDRGTSG ALMVAKSERA YLELIRQFKH HEVGKEYLAL
VYGTMAGASG EIRTGMGRHP VDRKRMAVLE KGGREAVSQW KVAVAWGEVS LLRVVIKTGR
THQIRVHLSH MQHPVVGDET YGGGKRKARA VKSDVLRELL MEVDRQMLHA VGLAFRHPVS
GADLSFTAPL PPDFAGLLER IRISLQKEGA GRSDPSGVGM DKLP
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