| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3649 |
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| Symbol | |
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| ID | 4458039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4456716 |
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| End bp | 4458296 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639704421 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_847754 |
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| Protein GI | 116751067 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0277903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.752498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTC TGGTCAGCGA TAACCTGGCT GAGTCGGGCG TTGAGAAGCT CAGAAAGGTT
CAACAATTTG AAGTGGATGT GAAAACCGGT CTGACGCCCG ACGAACTCCG CGGGATCATC
AAGGACTACG ACGGCCTGGT GATCCGTAGC GCGACCAAGG TGACCCGGGA CATCATAGAC
GCTGCGGACA ATCTCAAGGT TGTGGCCAGG GCGGGCATCG GCCTGGACAA TGTCGACGTC
GAAGCCGCCA GCAAGCGCGG GATTGTGGTG ATGAACACCC CGGAAGGGAA CATCGTCACC
ACCGCGGAAC ACGCCATCGC CATGATCCTG GCGCTTAGCC GGAGCATTCC CCAGGCCACC
AATTCCATCA AGAGCGGCAA GTGGGAGAAG AAACGTTTCA TGGGCCGGGA GGTGTTCAAC
AAAGTACTCG GTATCATCGG GATGGGACGC ATCGGGCGCA TTGTGGCCGA TCGGGCCAAA
GGTTTGAAAA TGAACGTCAT CGCCTTCGAC CCGTACATCA GCTCCGAGGT GCTGGAGTCT
TCGGGCATAG AGGCGGTCGC CCTCGACGAC CTGCTGACGC GCTCCGACTA CATCACCGTC
CATACGCCGA TGACGCCGGA AACCCGGGAC ATCTTGAACG CAAAAGCTTT CAAAAAGATG
AAGGAAGGTG TTTTCGTCAT CAACTGCGCC AGGGGAGGCA TCGTCAACGA ACAGGATCTC
CATGACGCCA TACGGGCCGG GATCGTGGCC GGTGCGGCTC TCGACGTTTT CGCTCAGGAA
CCGCCCAAGG ACAACCCTCT CCTGGCCCTC GACAGCGTCA TCGCTACGCC GCACCTGGGG
GCATCCACGG ACGAGGCGCA GGAGAACGTC GCCATCGCGG TGGCGGACCA GGTCATCGAT
TTCCTGGTGC GCGGCACCAT AAGGAATGCC GTGAACGCCC CCAATATCGA CGGCGCCGTG
CTCGCCCGGC TTCGTCCCTA CCTGAAGCTC TCCGAGAAGC TTGGTTCCGT CCTCACTCAG
ATCACCCGGG GAGCCATTCA AAAGGTATCC ATCGAATACA TCGGGGAAGT GGCGTCCATG
GAGACCCAGC CTTTGACCTA TTCCATACTG AAGGGGATGC TCACCCCGAT AATGGGAGAT
ATGGTCAACT TCGTGAACGT TCCGGTCCTT GCCCGCGAGC GGAACATCAA GGTGACGGAA
TCCGTGCGCA GCGAGGCCGA GGACTTCACC AACCTGATCG GCATTCACGT GAAAACCTCG
GAAGAAGAGA ACCTGGTGGC AGGGTCGTTC TTCGGGAAGA AAGACCCCCG CATGGTCAGG
ATCAACGATT TCCGCCTGGA GGCCGCCCTC GAAGGTCACC TGCTGCTCAT TTACAACATC
GACACTCCCG GCACCATCGG AGCGATCGGG ACCTGTCTCG GGAAACACCA CATCAACATC
TCCATGATGG ATGTCGGACA GGTGCTCGAA CGCGGTCAAA ACATCATATT CCTTCGGACC
GACACTCCCG TTCCGGGCCA CGTGAAGGAG GAACTGCTGG CCATGGACAA TGTGAACGTC
GTTCAGGCCA TTGAACTTTG A
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| Protein sequence | MKILVSDNLA ESGVEKLRKV QQFEVDVKTG LTPDELRGII KDYDGLVIRS ATKVTRDIID
AADNLKVVAR AGIGLDNVDV EAASKRGIVV MNTPEGNIVT TAEHAIAMIL ALSRSIPQAT
NSIKSGKWEK KRFMGREVFN KVLGIIGMGR IGRIVADRAK GLKMNVIAFD PYISSEVLES
SGIEAVALDD LLTRSDYITV HTPMTPETRD ILNAKAFKKM KEGVFVINCA RGGIVNEQDL
HDAIRAGIVA GAALDVFAQE PPKDNPLLAL DSVIATPHLG ASTDEAQENV AIAVADQVID
FLVRGTIRNA VNAPNIDGAV LARLRPYLKL SEKLGSVLTQ ITRGAIQKVS IEYIGEVASM
ETQPLTYSIL KGMLTPIMGD MVNFVNVPVL ARERNIKVTE SVRSEAEDFT NLIGIHVKTS
EEENLVAGSF FGKKDPRMVR INDFRLEAAL EGHLLLIYNI DTPGTIGAIG TCLGKHHINI
SMMDVGQVLE RGQNIIFLRT DTPVPGHVKE ELLAMDNVNV VQAIEL
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